BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00669 (UTR included)
(4015 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2671_C1 1602 0.0
BF14_335_C5 98 1e-19
BF14_335_C4 96 5e-19
BF01043B1E03 94 2e-18
BF01044B2F11 82 8e-15
BF01017A1F03 80 3e-14
BF01016B1E06 80 3e-14
BF01021A2B11 76 5e-13
BF01049B1F01 72 8e-12
>BF14_2671_C1
Length = 832
Score = 1602 bits (808), Expect = 0.0
Identities = 826/832 (99%)
Strand = Plus / Plus
Query: 433 cacagtttgaaaatgcaggccgtgtcatgctttgaaaaaaatcattttatacttgatttt 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cacagtttgaaaatgcaggccgtgtcatgctttgaaaaaaatcattttatacttgatttt 60
Query: 493 ggtggaaaatgtcggaccctaaacgtgctagtcttataacagcgggtgctccaaaaagtg 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggtggaaaatgtcggaccctaaacgtgctagtcttataacagcgggtgctccaaaaagtg 120
Query: 553 caaagaataatgtaaataaaacattgagattgtctataaatttagacgtaagtgacgaaa 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caaagaataatgtaaataaaacattgagattgtctataaatttagacgtaagtgacgaaa 180
Query: 613 caaaatatccagagctgaattacaaggaactatacgcagcagcattgaaaaagaagcgtg 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caaaatatccagagctgaattacaaggaactatacgcagcagcattgaaaaagaagcgtg 240
Query: 673 gtgagaactgtaagacatcaggtcttgatcctttctccgataatgatgatgatattaaaa 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtgagaactgtaagacatcaggtcttgatcctttctccgataatgatgatgatattaaaa 300
Query: 733 gggctacaaggaaatttgaacagaaatatggtggaaaaagtacatatggaaaaaagggaa 792
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 301 gggctacgaggaaatttgaacagaaatatggtggaaaaagtacatatggaaagaagggaa 360
Query: 793 ggtcgaaatatgatgattttgctgacattggagctggctatgatgagaatgactccttca 852
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 361 ggtcgaaatatgatgattttgctgacattggagctggttatgatgagaatgactccttca 420
Query: 853 ttgacaacacagacggttatgatgagataatgccaccagaatgtgacacagagtatggag 912
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 421 ttgacaacacagacggttatgatgagataatgccaccagaatgtgacacggagtatggag 480
Query: 913 gtttctatatcaacagcggggatcttgagttcaagactgtacctgaaaacaataagcgcg 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtttctatatcaacagcggggatcttgagttcaagactgtacctgaaaacaataagcgcg 540
Query: 973 gactatcatcaagcagtagtgaggaggagtcgtctgcgagttcttcggattctgatagtc 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gactatcatcaagcagtagtgaggaggagtcgtctgcgagttcttcggattctgatagtc 600
Query: 1033 aagaggcgaaagacacaaaggtcatcaccaatgggaacgtcgactcacataagactgagc 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aagaggcgaaagacacaaaggtcatcaccaatgggaacgtcgactcacataagactgagc 660
Query: 1093 atcggaaaaagaagaacaagactattgacaagcagaaagcaaagaagatcagaagaacag 1152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atcggaaaaagaagaacaagactattgacaagcagaaagcaaagaagatcagaagaacag 720
Query: 1153 attcctcagcagctacatcagggaaacagacatcggatgagaacgcccccgcggatgggt 1212
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 attcctcagcagctacgtcagggaaacagacatcggatgagaacgcccccgcggatgggt 780
Query: 1213 cgaccggtgattcaagatcgtcagcttccgattccctcacctccaaaccagc 1264
|||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 cgaccggtgactcaagatcgtcagcttccgattccctcacctccaaaccagc 832
>BF14_335_C5
Length = 1597
Score = 97.6 bits (49), Expect = 1e-19
Identities = 77/88 (87%)
Strand = Plus / Plus
Query: 1689 agagagaggtgcttggacagtggaggtgagcgtttaacgcgcattagacaggggcctctt 1748
||||||||| |||||||| |||||||||||||||||| |||| |||||||||||| |||
Sbjct: 1442 agagagaggagcttggacggtggaggtgagcgtttaatgcgcgttagacaggggcgcctt 1501
Query: 1749 aaacctacacctgggtcgcaagtcccag 1776
|||||||||| |||||||||||||
Sbjct: 1502 aaacctacacnnnnntcgcaagtcccag 1529
>BF14_335_C4
Length = 1491
Score = 95.6 bits (48), Expect = 5e-19
Identities = 78/88 (88%)
Strand = Plus / Plus
Query: 1689 agagagaggtgcttggacagtggaggtgagcgtttaacgcgcattagacaggggcctctt 1748
||||||||| ||||||| ||| ||||||||||||||| |||| | ||| | |||| |||
Sbjct: 1194 agagagaggagcttggaaagttgaggtgagcgtttaatgcgcgtaagataaaggcccctt 1253
Query: 1749 aaacctacacctgggtcgcaagtcccag 1776
||||||||||||||||||||||||||||
Sbjct: 1254 aaacctacacctgggtcgcaagtcccag 1281
>BF01043B1E03
Length = 830
Score = 93.7 bits (47), Expect = 2e-18
Identities = 77/87 (88%)
Strand = Plus / Plus
Query: 1689 agagagaggtgcttggacagtggaggtgagcgtttaacgcgcattagacaggggcctctt 1748
||||||||| |||||||||||||||||||| ||||||||| ||||| ||||||| ||
Sbjct: 338 agagagaggaccttggacagtggaggtgagcacttaacgcgcgttagataggggcccttt 397
Query: 1749 aaacctacacctgggtcgcaagtccca 1775
||||||| |||||||| ||||||||||
Sbjct: 398 aaacctatacctgggttgcaagtccca 424
>BF01044B2F11
Length = 728
Score = 81.8 bits (41), Expect = 8e-15
Identities = 77/88 (87%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 1689 agagagaggtgcttggacagtggaggtgagcgtttaacgcgcattagacaggggcctctt 1748
||||||||| |||||||||||||||||||||||||| | || |||| ||||||| |||
Sbjct: 594 agagagaggagcttggacagtggaggtgagcgttta--tcacagtagataggggccactt 651
Query: 1749 aaacctacacctgggtcgcaagtcccag 1776
||||||||||||| | |||||||||||
Sbjct: 652 aaacctacacctgaattgcaagtcccag 679
>BF01017A1F03
Length = 782
Score = 79.8 bits (40), Expect = 3e-14
Identities = 72/82 (87%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 1689 agagagaggtgcttggacagtggaggtgagcgtttaacgcgcattagacaggggcctctt 1748
||||||||| |||| || ||||||||||||||||||||||||||||| ||| || |
Sbjct: 209 agagagaggagcttccacggtggaggtgagcgtttaacgcgcattagataggtccc---t 265
Query: 1749 aaacctacacctgggtcgcaag 1770
||||||||||||||||||||||
Sbjct: 266 aaacctacacctgggtcgcaag 287
>BF01016B1E06
Length = 606
Score = 79.8 bits (40), Expect = 3e-14
Identities = 71/79 (89%), Gaps = 3/79 (3%)
Strand = Plus / Minus
Query: 1689 agagagaggtgcttggacagtggaggtgagcgtttaacgcgcattagacaggggcctctt 1748
||||||||| | |||||| |||||||||||||||||||||| ||||| | ||||| |||
Sbjct: 305 agagagaggagattggacggtggaggtgagcgtttaacgcg--ttagata-gggcccctt 249
Query: 1749 aaacctacacctgggtcgc 1767
|||||||||||||||||||
Sbjct: 248 aaacctacacctgggtcgc 230
>BF01021A2B11
Length = 729
Score = 75.8 bits (38), Expect = 5e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 1691 agagaggtgcttggacagtggaggtgagcgtttaacgcgcattagacaggggcctcttaa 1750
||||||| |||||||| |||||||||||||||||||||| ||||| ||||| ||| |
Sbjct: 373 agagaggagcttggacggtggaggtgagcgtttaacgcgtgttagatcggggcgccttca 432
Query: 1751 acctacacctgggt 1764
||||||||||||||
Sbjct: 433 acctacacctgggt 446
>BF01049B1F01
Length = 840
Score = 71.9 bits (36), Expect = 8e-12
Identities = 76/88 (86%), Gaps = 1/88 (1%)
Strand = Plus / Minus
Query: 1689 agagagaggtgcttggacagtggaggtgagcgtttaacgcgcattagacaggggcctctt 1748
||||||||| |||||||| || |||||| | |||||||| | ||||| |||| || |||
Sbjct: 702 agagagaggagcttggacggtagaggtgggtgtttaacgggagttagatagggccc-ctt 644
Query: 1749 aaacctacacctgggtcgcaagtcccag 1776
| ||||||||||||||||||||||||||
Sbjct: 643 acacctacacctgggtcgcaagtcccag 616
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 363,344
Number of extensions: 6244
Number of successful extensions: 6244
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 6240
Number of HSP's successfully gapped: 9
Length of query: 4015
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3997
Effective length of database: 8,109,745
Effective search space: 32414650765
Effective search space used: 32414650765
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)