BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00701 (UTR included)
(1564 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2222_C1 1400 0.0
>BF14_2222_C1
Length = 1058
Score = 1400 bits (706), Expect = 0.0
Identities = 724/730 (99%)
Strand = Plus / Plus
Query: 320 aagcttgtgtgtattgaacgagaattattccgtctgtaacattgatgttgcctttcgaga 379
|||||||| ||||||||| |||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 5 aagcttgtctgtattgaaagagaattatttcgtctgttacattgatgttgcctttcgaga 64
Query: 380 gaatactagaaaaacgagatgcgttaaatattttgactataccgaattcatgttcatgtt 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gaatactagaaaaacgagatgcgttaaatattttgactataccgaattcatgttcatgtt 124
Query: 440 atctttaatgtgcactgtgattagttatatttgtttatagttttttattcttgcgatcgt 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 atctttaatgtgcactgtgattagttatatttgtttatagttttttattcttgcgatcgt 184
Query: 500 gatgttggtctgtcaccctcgttccaagaccgttaaaccccttaagccctattgccaatg 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gatgttggtctgtcaccctcgttccaagaccgttaaaccccttaagccctattgccaatg 244
Query: 560 ctggaataaaaaggtacctgtgttatgggtcgacagaggcgcttgcggatgtggcgaaga 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ctggaataaaaaggtacctgtgttatgggtcgacagaggcgcttgcggatgtggcgaaga 304
Query: 620 tgataatgttattgaatggggatgggatctcccggacagttcccgtgccagcagagttgt 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tgataatgttattgaatggggatgggatctcccggacagttcccgtgccagcagagttgt 364
Query: 680 ggtcagcgaggacaggaagcaagtcacattccatccattcttcagcacgggaactgcggc 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ggtcagcgaggacaggaagcaagtcacattccatccattcttcagcacgggaactgcggc 424
Query: 740 cgtcaagggagtagtgccaatgaaactaaattatcattattactgggaggtcaagatact 799
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tgtcaagggagtagtgccaatgaaactaaattatcattattactgggaggtcaagatact 484
Query: 800 atcagagacatatggaactgatattatggtagggttggcaaccgacaggatcaacacgga 859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 atcagagacatatggaactgatattatggtagggttggcaaccgacaggatcaacacgga 544
Query: 860 ggactcccagttccggtttacgtcactcctgggcagtgacggcgagtcttatggcttctc 919
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ggactcccagttccggttcacgtcactcctgggcagtgacggcgagtcttatggcttctc 604
Query: 920 gtacacgggagccgtgcgtcacgatgacgtgtcgtcccgggactcgtccggcttctgtcg 979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 gtacacgggagccgtgcgtcacgatgacgtgtcgtcccgggactcgtccggcttctgtcg 664
Query: 980 cggcagtatagtgggagtcaggctggacatgtggcacgggaccctggagttcttcgtcaa 1039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 cggcagtatagtgggagtcaggctggacatgtggcacgggaccctggagttcttcgtcaa 724
Query: 1040 caggaaacct 1049
||||||||||
Sbjct: 725 caggaaacct 734
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 238,867
Number of extensions: 5706
Number of successful extensions: 5706
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5706
Number of HSP's successfully gapped: 1
Length of query: 1564
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1547
Effective length of database: 8,119,229
Effective search space: 12560447263
Effective search space used: 12560447263
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)