BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00706 (UTR included)
(3274 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01009B2F05 1239 0.0
BF01029A2E06 426 e-119
>BF01009B2F05
Length = 651
Score = 1239 bits (625), Expect = 0.0
Identities = 643/649 (99%)
Strand = Plus / Plus
Query: 364 ttactaatagatcttattatgtatacaataaatcttaaactctacaaataatgtaaaact 423
||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 3 ttactaataaattttattatgtatacaataaatcttaaactctacaaataatataaaact 62
Query: 424 aatgagaccatttacgtggtaacataaagacactaatttgtaatgtatgtttaagtgctt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 aatgagaccatttacgtggtaacataaagacactaatttgtaatgtatgtttaagtgctt 122
Query: 484 gattttataacatcaacatgagttacaattcgagtgggggcaaggggttcggattttccg 543
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gaatttataacatcaacatgagttacaattcgagtgggggcaaggggttcggattttccg 182
Query: 544 gattcacgatgccaaaacggaacccttcgaacgtttcactacacgctgttcctccgcctc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gattcacgatgccaaaacggaacccttcgaacgtttcactacacgctgttcctccgcctc 242
Query: 604 cttcccaaatgaatgctgtccctcctccgaatcccgggttatcgaagcagggttattcaa 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 cttcccaaatgaatgctgtccctcctccgaatcccgggttatcgaagcagggttattcaa 302
Query: 664 ctatgaacgcgataacacagaacgccatcggtggtacttggggtacacttgggaaaaagc 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ctatgaacgcgataacacagaacgccatcggtggtacttggggtacacttgggaaaaagc 362
Query: 724 gagctaagactgaagatgagtattttgatgaagatgatgagcctccgactccagctcttg 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gagctaagactgaagatgagtattttgatgaagatgatgagcctccgactccagctcttg 422
Query: 784 cttatataccagcaccagggagccctactaatgaagccaacagctctagggcaaatgaag 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 cttatataccagcaccagggagccctactaatgaagccaacagctctagggcaaatgaag 482
Query: 844 aagaggaagatcccctggacgcgtacatggccggtctggagaaacaggcggctaaagata 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 aagaggaagatcccctggacgcgtacatggccggtctggagaaacaggcggctaaagata 542
Query: 904 tgaaggttagcaaagagaatgccgttagtggaaaaggtgacgccgggagagggaccagag 963
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 543 tgaaggttagcaaagagaatgcggttagtggaaaaggtgatgccgggagagggaccagag 602
Query: 964 gagatattgatgagatggacgacgaagaaagttactataaatacatgga 1012
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 gagatattgatgagatggacgacgaagaaagttactataaatacatgga 651
>BF01029A2E06
Length = 259
Score = 426 bits (215), Expect = e-119
Identities = 221/223 (99%)
Strand = Plus / Plus
Query: 2586 gccaccgaccgcctcgcctcgctcaaacaagccttccgctcacaatacaaccagttcacc 2645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gccaccgaccgcctcgcctcgctcaaacaagccttccgctcacaatacaaccagttcacc 71
Query: 2646 gcgtcgtctgaccactcgtgggagcagacgcggcccgtcctccagccgggggtgaacgcg 2705
|||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 gcgtcgtcggaccactcctgggagcagacgcggcccgtcctccagccgggggtgaacgcg 131
Query: 2706 ccggccaacgcgaacacggacaaaaccgagagactgcgcaagagcggcaagaagagccgc 2765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 ccggccaacgcgaacacggacaaaaccgagagactgcgcaagagcggcaagaagagccgc 191
Query: 2766 tgggaatagtgtacatacaatatattacagttgatatgatgcc 2808
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 tgggaatagtgtacatacaatatattacagttgatatgatgcc 234
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 304,653
Number of extensions: 6199
Number of successful extensions: 6199
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6199
Number of HSP's successfully gapped: 2
Length of query: 3274
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3256
Effective length of database: 8,109,745
Effective search space: 26405329720
Effective search space used: 26405329720
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)