BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00717 (UTR included)
(1522 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01015B1B04 1193 0.0
BF01056A1F11 313 4e-85
BF14_2112_C1 153 1e-36
>BF01015B1B04
Length = 618
Score = 1193 bits (602), Expect = 0.0
Identities = 614/618 (99%)
Strand = Plus / Plus
Query: 429 ttagttagttgaaacaaaagttttaaagaactaaaaatatataatggtgaactaaacttt 488
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 ttagttagttgaaacaaaagttttaaagaactaacaatatataatggtgaactaaacttt 60
Query: 489 ttgaattatacaatgttctaccacatatcgttggagcatgaaatactgctgcatccaaga 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgaattatacaatgttctaccacatatcgttggagcatgaaatactgctgcatccaaga 120
Query: 549 tattttggaccgcaattattagatactgttaaacagaagttgtatacagaggtggaagga 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tattttggaccgcaattattagatactgttaaacagaagttgtatacagaggtggaagga 180
Query: 609 acttgcactggcaaatatggttttgttatagcagtgaccacaatagacagcattggtgca 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acttgcactggcaaatatggttttgttatagcagtgaccacaatagacagcattggtgca 240
Query: 669 ggtctcatccaaccaggacaaggattcgttgtgtatccagttaaatataaagccatagtt 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggtctcatccaaccaggacaaggattcgttgtgtatccagttaaatataaagccatagtt 300
Query: 729 ttcagaccatttaaaggagaggttcttgacgctatagtcacacaagtgaataaggttgga 788
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 301 ttcagaccatttaaaggagaggttcttgacgctatagtcacacaagtgaataaggtcgga 360
Query: 789 atgtttgctcaaatcggtccgttaagttgttttatatcacatcattccatacccactgat 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atgtttgctcaaatcggtccgttaagttgttttatatcacatcattccatacccactgat 420
Query: 849 atggaattctgtcccaatgtaaatcccccgtgctataaaagtaaacaggaagataatgtc 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atggaattctgtcccaatgtaaatcccccgtgctataaaagtaaacaggaagataatgtc 480
Query: 909 atacaggaagaggatgtcattagattaaagattgttggcaccagagttgatgccacgggc 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atacaggaagaggatgtcattagattaaagattgttggcaccagagttgatgccacgggc 540
Query: 969 atttttgccatcggaacactaatggacgactacttaggattagtaacacaatgaaataaa 1028
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 541 atttttgccatcggaacactaatggacgactacttaggattagtaacacaatgaattcaa 600
Query: 1029 atattttaagaataaaaa 1046
||||||||||||||||||
Sbjct: 601 atattttaagaataaaaa 618
>BF01056A1F11
Length = 221
Score = 313 bits (158), Expect = 4e-85
Identities = 164/166 (98%)
Strand = Plus / Plus
Query: 1065 attatctttatttggcattcaaataatagtgtaaaatatgcatgtaacaaaaacaatcat 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 attatctttatttggcattcaaataatagtgtaaaatatgcatgtaacaaaaacaatcat 108
Query: 1125 caaaaaaggacaaaatatttggacacctcagtctctagggcagtttgtgtgtgacttgct 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 caaaaaaggacaaaatatttggacacctcagtctctagggcagtttgtgtgtgacttgct 168
Query: 1185 gactgtgctcgtacaataatcatatcaccttaaatctaaaataaaa 1230
||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 169 gactgggctcgtacaataatcatatcaccttaaatctaaaaaaaaa 214
>BF14_2112_C1
Length = 1045
Score = 153 bits (77), Expect = 1e-36
Identities = 77/77 (100%)
Strand = Plus / Minus
Query: 1 aataaatagtcgtaagtttttgccatttttttatatcaactgattacaggatacacagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 aataaatagtcgtaagtttttgccatttttttatatcaactgattacaggatacacagcc 18
Query: 61 agtcactcatttggcat 77
|||||||||||||||||
Sbjct: 17 agtcactcatttggcat 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 250,203
Number of extensions: 10402
Number of successful extensions: 10402
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 10402
Number of HSP's successfully gapped: 3
Length of query: 1522
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1505
Effective length of database: 8,119,229
Effective search space: 12219439645
Effective search space used: 12219439645
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)