BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00738 (UTR included)
(3400 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01011A1E09 950 0.0
BF14_3142_C1 690 0.0
>BF01011A1E09
Length = 786
Score = 950 bits (479), Expect = 0.0
Identities = 494/499 (98%)
Strand = Plus / Plus
Query: 2138 ggataagtccaaggataagacaaagaaggtgctcgtgaaaacaatcgaattgccgatcga 2197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ggataagtccaaggataagacaaagaaggtgctcgtgaaaacaatcgaattgccgatcga 347
Query: 2198 gtcgcgaactcacggttttgctcaacacgaacttaacacttacatggaacaagagggaaa 2257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 348 gtcgcgaactcacggttttgctcaacacgaacttaacacttacatggaacaagagggtaa 407
Query: 2258 aatgcaagctcaggaccgtcaggagaaggagcgcgcggatgctcggaacgccctcgaaga 2317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 aatgcaagctcaggaccgtcaggagaaggagcgcgcggatgctcggaacgccctcgaaga 467
Query: 2318 atacgtgtacgagttgagaggaaaactatcagagggcgaagtcctacacgactttgtagc 2377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 atacgtgtacgagttgagaggaaaactatcagagggcgaagtcctacacgactttgtagc 527
Query: 2378 ggaggatcaaaggaacaagctggtaaacactctagacgcactcgaacaatggctttacga 2437
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 528 ggaggatcaaaggaacaagctggtgaacactctagacgcactcgaacagtggctttacga 587
Query: 2438 cgagggggaggatcagaacagacaggtgtacagtgacaaactcagtgaattaaagacgga 2497
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 cgagggagaggatcagaacagacaggtgtacagtgacaaactcagtgaattaaagacgga 647
Query: 2498 aggtgagccgatcaaacagcgccgattggagttcgagcttcgtccgggggcgttggacga 2557
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 648 aggtgagccgatcaaacagcgccgattggagttcgagctccgtccgggggcgttggacga 707
Query: 2558 cttcgctctggcgatacaactaacaaacaaggcgatcgacctgtacagatctggtgacgc 2617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 cttcgctctggcgatacaactaacaaacaaggcgatcgacctgtacagatctggtgacgc 767
Query: 2618 gaagtattgtcacctatct 2636
|||||||||||||||||||
Sbjct: 768 gaagtattgtcacctatct 786
Score = 416 bits (210), Expect = e-116
Identities = 213/214 (99%)
Strand = Plus / Plus
Query: 1905 gaaggcgagtcacaaaaagtgaaactaaaagtgcgagtcaacatccacggcatcataacc 1964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaggcgagtcacaaaaagtgaaactaaaagtgcgagtcaacatccacggcatcataacc 60
Query: 1965 gtcgcgtccgcgtccctcctggaaaagaaacaggactcggctcagaacgaaaacgttgaa 2024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtcgcgtccgcgtccctcctggaaaagaaacaggactcggctcagaacgaaaacgttgaa 120
Query: 2025 atggaaaacgcgaacgagaacgctcaggctcaggaagctccgatggagacgaacggcagc 2084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 121 atggaaaacgcgaacgagaacgctcaggctcaggaagctccgatggagacgaacggcggc 180
Query: 2085 gggcaggaacagaacggcctggacaaccaagagg 2118
||||||||||||||||||||||||||||||||||
Sbjct: 181 gggcaggaacagaacggcctggacaaccaagagg 214
>BF14_3142_C1
Length = 1167
Score = 690 bits (348), Expect = 0.0
Identities = 391/405 (96%), Gaps = 1/405 (0%)
Strand = Plus / Minus
Query: 2996 atgtttttgcatttgaataactcacatttaatgtaagcaatacaaatctctaatgtgtta 3055
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1167 atgtttttgcatttgaataactcacatttnnnttaagcaatacaaatctctaatgtgtta 1108
Query: 3056 atattaataattttattatgtatctgtatccgtgaactattaatttcttttgtgacaaat 3115
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1107 atattaataattttatt-tgtatctgtatccgtgaactattaatttcttttgtgacaaat 1049
Query: 3116 tgttgttgaatcttctgaaattatacgtctgtgtgttcatgatcggatttactggattgt 3175
|||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1048 tgttgttgaatcttctaaaattatacgtctgtgtgttcatgatctgatttactggattgt 989
Query: 3176 attacgattagcagcttcaaggattggttgtctcgaattgttattaggaatccgctccct 3235
|||| || |||||| |||||||| | |||||||||||||||||||||||||||||| ||
Sbjct: 988 attaagagtagcagtttcaaggagggtttgtctcgaattgttattaggaatccgctcact 929
Query: 3236 gtgttgtcagcagtgttcagtccacaggtgcgaacacacatgcatcacacctgtgttgtt 3295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 gtgttgtcagcagtgttcagtccacaggtgcgaacacacatgcatcacacctgtgttgtt 869
Query: 3296 acatatgtattttgtttatcttttatatttatatataatagtgcatttctattgtagtaa 3355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 acatatgtattttgtttatcttttatatttatatataatagtgcatttctattgtagtaa 809
Query: 3356 ctctgaatagtattaattttatatatatcggttgtactgtctgta 3400
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 ctctgaatagtattaattttatatatatcggttgtactgtctgta 764
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 333,116
Number of extensions: 6401
Number of successful extensions: 6401
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6400
Number of HSP's successfully gapped: 3
Length of query: 3400
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3382
Effective length of database: 8,109,745
Effective search space: 27427157590
Effective search space used: 27427157590
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)