BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00739 (UTR included)
(2326 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01050A2C05 896 0.0
>BF01050A2C05
Length = 763
Score = 896 bits (452), Expect = 0.0
Identities = 458/460 (99%)
Strand = Plus / Plus
Query: 233 cagacgcgagatcattgagtatcttctatcaaagggagcgaaggtagatgccatcggtgg 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 cagacgcgagatcattgagtatcttctatcaaagggagcgaaggtagatgccatcggtgg 363
Query: 293 cgagctccaatcgacgccgctccactggtccacacggcaaggtcatttggaagccactgt 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 cgagctccaatcgacgccgctccactggtccacacggcaaggtcatttggaagccactgt 423
Query: 353 cgctttgattagggcgggcggagatccgtctcttagagatgccgaaggttgcggctgcct 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 424 cgctttgattagggcgggcggagatccgtctcttagagatgccgaaggttgcggctgtct 483
Query: 413 gcatttggcagcgcaattcggtcatacagctgtcgtggcttacttggtggcacgaggggt 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gcatttggcagcgcaattcggtcatacagctgtcgtggcttacttggtggcacgaggggt 543
Query: 473 gcctccggacgcgcccgacgcgggcgggatgacgccgctcatgtgggccagctggaaggt 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gcctccggacgcgcccgacgcgggcgggatgacgccgctcatgtgggccagctggaaggt 603
Query: 533 ttgcgctgtggacccgaccaggcttctgctaaccctgggcgcctcccctcaaccagcgga 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 ttgcgctgtggacccgaccaggcttctgctaaccctgggcgcctcccctcaaccagcgga 663
Query: 593 ccatgcgcacggcaacacggcgcttcattgggcaatcctggccagaaacgccaccgccat 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 ccatgcgcacggcaacacggcgcttcattgggcaatcctggccagaaacgccaccgccat 723
Query: 653 atctacacttatcctctatggaaatgcaagtttggatgta 692
|||||||||||||||||||||||| |||||||||||||||
Sbjct: 724 atctacacttatcctctatggaaacgcaagtttggatgta 763
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 209,738
Number of extensions: 4573
Number of successful extensions: 4573
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4573
Number of HSP's successfully gapped: 1
Length of query: 2326
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2309
Effective length of database: 8,119,229
Effective search space: 18747299761
Effective search space used: 18747299761
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)