BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00747 (UTR included)
(1870 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01044B1H08 549 e-156
>BF01044B1H08
Length = 726
Score = 549 bits (277), Expect = e-156
Identities = 295/301 (98%), Gaps = 5/301 (1%)
Strand = Plus / Plus
Query: 299 agagttgaagacgaagcgtcttcgccagttaataaa-----cgataaaagcggcttcatc 353
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 426 agagttgaagacgaagcgtcttcgccagttaataaagtaaacgataaaagcggcttcatc 485
Query: 354 acgccgccccaacagaatggcggcggggagtcgccccctcccgagaaagagagggctgac 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 acgccgccccaacagaatggcggcggggagtcgccccctcccgagaaagagagggctgac 545
Query: 414 caagaggacacggaaaagagacactctggacccgtgcctcactgtgctgagggacccaac 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 caagaggacacggaaaagagacactctggacccgtgcctcactgtgctgagggacccaac 605
Query: 474 gatgatctttacgccatccctgttaaactcagacccaagaaagaaactttgcctcccgga 533
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 606 gatgatctttacgccatccctgttaaactgagacccaagaaagaaactttgcctcccgga 665
Query: 534 tgggaaaaacatgaagataacgatggcccatactactggcacataaagagcggcacaatt 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 tgggaaaaacatgaagataacgatggcccatactactggcacataaagagcggcacaatt 725
Query: 594 c 594
|
Sbjct: 726 c 726
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 143,476
Number of extensions: 2258
Number of successful extensions: 2258
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2257
Number of HSP's successfully gapped: 1
Length of query: 1870
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1853
Effective length of database: 8,119,229
Effective search space: 15044931337
Effective search space used: 15044931337
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)