BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00760 (UTR included)
(2239 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01057B2B01 90 2e-17
BF14_736_C1 82 4e-15
BF01054B2B08 76 3e-13
BF01039A2C03 72 4e-12
>BF01057B2B01
Length = 555
Score = 89.7 bits (45), Expect = 2e-17
Identities = 124/149 (83%), Gaps = 1/149 (0%)
Strand = Plus / Plus
Query: 91 tttatagttttcaaatacaagtcgatactaaaatgtttccattacaatataaccatggtt 150
|||||||||||||||||||||| |||||| ||||| ||||||||| | || ||||||
Sbjct: 38 tttatagttttcaaatacaagtagatacttgtatgttgccattacaaaactacaatggtt 97
Query: 151 cagtattatgattaattttaaccagtcataaaaataattctaagggttatagtatataac 210
|||| |||| | ||||| || ||||||| ||||||||| ||||| |||||||| || |
Sbjct: 98 cagtgttataagtaattacaatcagtcattaaaataattgtaaggattatagta-attat 156
Query: 211 aattagtgaggcacagatggcgccacttg 239
|||||| ||| ||||||||||||||||
Sbjct: 157 gattagtacggcgcagatggcgccacttg 185
>BF14_736_C1
Length = 796
Score = 81.8 bits (41), Expect = 4e-15
Identities = 71/81 (87%)
Strand = Plus / Minus
Query: 524 aaaggccaaccggctctctcacttaatggacgaaattcagccatctaagactagttcacg 583
||||| ||||||||||||||||| | ||||||||| |||||| ||||||| ||||||
Sbjct: 731 aaagggcaaccggctctctcactcattggacgaaacgcagccactaaagactacttcacg 672
Query: 584 ccgattttctgtgagagggtg 604
||||| |||||||||||||||
Sbjct: 671 ccgatcttctgtgagagggtg 651
>BF01054B2B08
Length = 807
Score = 75.8 bits (38), Expect = 3e-13
Identities = 83/98 (84%)
Strand = Plus / Minus
Query: 504 aggaaagggcgggaacaggaaaaggccaaccggctctctcacttaatggacgaaattcag 563
||||||||| ||||||||| ||||| ||||||||||||||||| | | |||||| |||
Sbjct: 745 aggaaagggtgggaacagggaaagggcaaccggctctctcactcatcgaacgaaacgcag 686
Query: 564 ccatctaagactagttcacgccgattttctgtgagagg 601
|||| |||||| || |||||||| ||||||||||||
Sbjct: 685 ccattaaagactgctttacgccgatcttctgtgagagg 648
>BF01039A2C03
Length = 818
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 86 cagtatttatagttttcaaatacaagtcgatactaaaatgtttccattacaatataacca 145
||||||||||||||||||||||||||| ||||| ||||||| || |||||| || || |
Sbjct: 226 cagtatttatagttttcaaatacaagttcatacttaaatgttgcccttacaaaattacaa 167
Query: 146 tggttcagtatt 157
|||| |||||||
Sbjct: 166 tggtacagtatt 155
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 209,247
Number of extensions: 3303
Number of successful extensions: 3303
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 3302
Number of HSP's successfully gapped: 4
Length of query: 2239
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2222
Effective length of database: 8,119,229
Effective search space: 18040926838
Effective search space used: 18040926838
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)