BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00774 (UTR included)
(1451 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3110_C1 315 1e-85
BF01056B2E06 311 2e-84
BF01037B1D07 190 4e-48
>BF14_3110_C1
Length = 770
Score = 315 bits (159), Expect = 1e-85
Identities = 162/163 (99%)
Strand = Plus / Plus
Query: 223 aggccgttacaactgatcctgatattcttgttagtatggtactactgcacactgactatc 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 aggccgttacaactgatcctgatattcttgttagtatggtactactgcacactgactatc 667
Query: 283 cgggagagcatcttgaaggtgaacggatcccggatcaagggttggtggaggctgcaccac 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 cgggagagcatcttgaaggtgaacggatcccggatcaagggttggtggaggctgcaccac 727
Query: 343 ttcatatccacagtggtggccggtatcttactcatctggccgc 385
||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 728 ttcatatccacagtggtggccggcatcttactcatctggccgc 770
>BF01056B2E06
Length = 802
Score = 311 bits (157), Expect = 2e-84
Identities = 157/157 (100%)
Strand = Plus / Plus
Query: 754 caggtaacttacctcgcagctttgttccttattttgcactcctgcaacatgtatacaata 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 caggtaacttacctcgcagctttgttccttattttgcactcctgcaacatgtatacaata 568
Query: 814 tggcggacattacgaaagaaaactcagggcgggcgaaaacttcgctacaaattgcgtgcg 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 tggcggacattacgaaagaaaactcagggcgggcgaaaacttcgctacaaattgcgtgcg 628
Query: 874 atcgcttacagattgtctaatgagctagctgttttgg 910
|||||||||||||||||||||||||||||||||||||
Sbjct: 629 atcgcttacagattgtctaatgagctagctgttttgg 665
>BF01037B1D07
Length = 761
Score = 190 bits (96), Expect = 4e-48
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 664 caggtggcagcactaagtatgtcgttcctgttgatcggtattggtaatacagcgaccact 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 caggtggcagcactaagtatgtcgttcctgttgatcggtattggtaatacagcgaccact 62
Query: 724 ctcattgtgatcccgcagaagttgaacgaacaggta 759
||||||||||||||||||||||||||||||||||||
Sbjct: 63 ctcattgtgatcccgcagaagttgaacgaacaggta 98
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 204,722
Number of extensions: 4070
Number of successful extensions: 4070
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4070
Number of HSP's successfully gapped: 3
Length of query: 1451
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1434
Effective length of database: 8,119,229
Effective search space: 11642974386
Effective search space used: 11642974386
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)