BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00780 (UTR included)
(4915 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01050A1D05 1405 0.0
BF01059A1B11 783 0.0
>BF01050A1D05
Length = 766
Score = 1405 bits (709), Expect = 0.0
Identities = 753/769 (97%), Gaps = 3/769 (0%)
Strand = Plus / Plus
Query: 1720 cgaaattaatgaatcaaggaaatagtcagataaaaataatcaagaagactgtaccgcaga 1779
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgaaattcatgaatcaaggaaatagtcagataaaaataatcaagaagactgtaccgcaga 60
Query: 1780 atgttgcgcagaatattattcaaactaatgatcaagaatcggtaactaaagctcctgatg 1839
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 61 atgttgcgcagaatattattcaaactaatgatcaggaatcggtaactaaagctcctgatg 120
Query: 1840 taggactaactaaagatgtcaatgaaggtctaaatctaaatcagtccattgaaaatgaag 1899
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 121 taggactaactaaagatgtcaatgaaggtctaaatctaaatcagtctattgaaaatgaag 180
Query: 1900 ccaaagaggaaaataatagtgttgtcgatgacaatacagacatagaaagtagtaatgtcc 1959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccaaagaggaaaataatagtgttgtcgatgacaatacagacatagaaagtagtaatgtcc 240
Query: 1960 ataaagatgtttcagaagtaggggaaactacacattgtaaagagaccgacttggataata 2019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ataaagatgtttcagaagtaggggaaactacacattgtaaagagaccgacttggataata 300
Query: 2020 tgacaaatataccaaagtcaaacagtagtgtaaaagaagtcgatcgcacggaaccaaaaa 2079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgacaaatataccaaagtcaaacagtagtgtaaaagaagtcgatcgcacggaaccaaaaa 360
Query: 2080 catcaggacagaataatacagaagagattttagaaggcggcggtaatatatgtgaggcga 2139
||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 361 catcaggacag---aatacagaagagattatagaaggcggcgctaatatatgtgaggcga 417
Query: 2140 ccgacaattttcagcccagtcaaaaaaaagatgacattataagcgagtccaccagttcgt 2199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ccgacaattttcagcccagtcaaaaaaaagatgacattataagcgagtccaccagttcgt 477
Query: 2200 gtattaatacaagtaaagaaaacgaaggtgacatcgaaagagacgtggataatgtagctt 2259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gtattaatacaagtaaagaaaacgaaggtgacatcgaaagagacgtggataatgtagctt 537
Query: 2260 taaagactttaaacgctttaaaacatttaagtcatctattaacagtgaaacctgtggtga 2319
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 538 taaagactttaaacgctttaaaacatttaagccatctattaacagtgaaacctgtggtga 597
Query: 2320 atagtaagagtgttctgaaaacgagcgaagctaacaatgttaacaaggaagccgtcgaag 2379
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 atagtaagggtgttctgaaaacgagcgaagctaacaatgttaacaaggaagccgtcgaag 657
Query: 2380 ctgcgaaggaaacgaaactagataaaccgctgagaaatttatcggaacaaatcacaataa 2439
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 658 ctgcgaaggaaacgaaactagataaaccgctgnnnaatttatcggaacaaatcacaataa 717
Query: 2440 aacagccaaaatctccgtcggttagcgcgaacatggcgcctgatggtga 2488
|||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 718 aacagccannntctccgtcggttagcgcgaacatggcgcctgatggtga 766
>BF01059A1B11
Length = 860
Score = 783 bits (395), Expect = 0.0
Identities = 419/428 (97%)
Strand = Plus / Plus
Query: 3965 gactgttaaaagaccgtcggaggaagtcgcgcactttagctgtttcaagaaaccgaagga 4024
||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct: 433 gactgttaaaagaccgtcggacgaagtcgcgcacttcagctgcttcaagaaaccgaagga 492
Query: 4025 tgccgggatattccagaccgatgtccaggacagtgatgatgaagggacgacccagtactc 4084
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ttccgggatattccagaccgatgtccaggacagtgatgatgaagggacgacccagtactc 552
Query: 4085 cgcgtctcagagccagacgaaatacgccagcgtcaccaaaaccgtcaagggaaaggccgg 4144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 cgcgtctcagagccagacgaaatacgccagcgtcaccaaaaccgtcaagggaaaggccgg 612
Query: 4145 cgtcactgcgatgcagatgaaatctgaaaccagcaccagttcacaccaactcagcaagct 4204
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 613 cgtcactgcgatgcagatgaaatctgagaccagcaccagttcacaccaactcagcaaact 672
Query: 4205 gagcaatgtttccggtttaaagattgtcaaaacgaacgccagcaacaaagtggaagagaa 4264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 gagcaatgtttccggtttaaagattgtcaaaacgaacgccagcaacaaagtggaagagaa 732
Query: 4265 gtgtgaagtgacttccgcaaacaaaaataccttggaggctctggagaagttgcagaaaca 4324
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 733 gtgtgaagtgacttccgcnnncaaaaataccttggaggctctggagaagttgcagaaaca 792
Query: 4325 agggctcctgataaagaagccgcgttttgaagaatacagtgaacaaacggactcgcacag 4384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 agggctcctgataaagaagccgcgttttgaagaatacagtgaacaaacggactcgcacag 852
Query: 4385 cgagagcg 4392
||||||||
Sbjct: 853 cgagagcg 860
Score = 504 bits (254), Expect = e-142
Identities = 269/274 (98%)
Strand = Plus / Plus
Query: 3692 caaaactgtgaagaggttccaatcgcaaaccatcatcgaggagatcacgaccactgtcac 3751
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 1 caaaactgtgaagaggttccaatcgcaaaccatcatagaggagatcacgaccactgtgac 60
Query: 3752 taaaacaatccgaacagtcaatcaatctaccaatgaagaagtacagagcaccagccagct 3811
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taaaacaatccgaacagttaatcaatctaccaatgaagaagtacagagcaccagccagct 120
Query: 3812 agcgcccaaacctaatgcgagacctcaaaaaatcataaacagattgccccaaccgggcag 3871
||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 121 agcgcccaaacctaatgcgagacctcaaaaaatcataaatagattgccccaacctggcag 180
Query: 3872 agaattccaaggagcgacgatcaggcaaatcacaccaacggtgggaacaaaaattagaag 3931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agaattccaaggagcgacgatcaggcaaatcacaccaacggtgggaacaaaaattagaag 240
Query: 3932 tacgggcacggcggtgagatcaccaaaaccgctg 3965
||||||||||||||||||||||||||||||||||
Sbjct: 241 tacgggcacggcggtgagatcaccaaaaccgctg 274
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 559,095
Number of extensions: 10303
Number of successful extensions: 10303
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 10302
Number of HSP's successfully gapped: 3
Length of query: 4915
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4897
Effective length of database: 8,109,745
Effective search space: 39713421265
Effective search space used: 39713421265
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)