BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00796 (UTR included)
(1633 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01044B2F02 955 0.0
>BF01044B2F02
Length = 600
Score = 955 bits (482), Expect = 0.0
Identities = 515/528 (97%), Gaps = 8/528 (1%)
Strand = Plus / Plus
Query: 307 agatttaagaggtgatcgggtgacatttcaattatattttaatgttgatatatacaataa 366
||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 1 agatttaagaggtgatcgggtgacatttcnnntatattttaat--------atacaataa 52
Query: 367 aattaattaataaatgttataaataccctgtttttgtaatggaaggtaataaatgtagaa 426
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 aattaattaattaatgttataaataccctgtttttgtaatggaaggtaataaatgtagaa 112
Query: 427 tttgcttagaaattggagacgcactaataaacatatttaatttaacttactcgtcaaata 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 tttgcttagaaattggagacgcactaataaacatatttaatttaacttactcgtcaaata 172
Query: 487 tatcatcaaaaataatgtctttagccaatattgaaataaaacctgacgatggtttgccag 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 tatcatcaaaaataatgtctttagccaatattgaaataaaacctgacgatggtttgccag 232
Query: 547 atggaatatgtgaatcatgtaatgatcaactaaacaactgtattaaattcattgatcgct 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 atggaatatgtgaatcatgtaatgatcaactaaacaactgtattaaattcattgatcgct 292
Query: 607 gtaaaaagtcggattccatattaagaaacgtgtgctacaatgatataccatctaaatcac 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 gtaaaaagtcggattccatattaagaaacgtgtgctacaatgatataccatctaaatcac 352
Query: 667 aaacgacagacttaaataatgtgtgtattaaattagaagttagtgaaatagatatacaag 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 aaacgacagacttaaataatgtgtgtattaaattagaagttagtgaaatagatatacaag 412
Query: 727 aaaaatctagtttacaaaataatactagctgtgataaagtattaagtgattccaataata 786
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 aaaaatttagtttacaaaataatactagctgtgataaagtattaagtgattccaataata 472
Query: 787 caaacaaacaacaatgctttacttgtggaaaagttatgtcttccaagt 834
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 caaacaaacaacaatgctttacttgtggaaaagttatgtcttccaagt 520
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 279,883
Number of extensions: 7060
Number of successful extensions: 7060
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7060
Number of HSP's successfully gapped: 2
Length of query: 1633
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1616
Effective length of database: 8,119,229
Effective search space: 13120674064
Effective search space used: 13120674064
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)