BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00801 (UTR included)
(1981 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054B1F06 1457 0.0
>BF01054B1F06
Length = 781
Score = 1457 bits (735), Expect = 0.0
Identities = 765/776 (98%)
Strand = Plus / Plus
Query: 459 tgttattgattcataacttagacctttattggactgtataatatgtcgaatagaaaattg 518
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 6 tgttattgattcataacttagaccttcattggactgtataatatgtcgaatagaaaattg 65
Query: 519 tggggagaatttgaagatgaagaaaacaacgagacagtgttacaaactgttaattttaat 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 tggggagaatttgaagatgaagaaaacaacgagacagtgttacaaactgttaattttaat 125
Query: 579 ccgataattgaattgggattacaaaatataccagaaattcctataacggtaaagtcgaat 638
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 ccgatcattgaattgggattacaaaatataccagaaattcctataacggtaaagtcgaat 185
Query: 639 ccgattgaatggcctaaaccaaatcttattacacatacgatacaattacatgcttactct 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ccgattgaatggcctaaaccaaatcttattacacatacgatacaattacatgcttactct 245
Query: 699 cgccaattgtcagccattatagatcagggggaaaacgctgcctatgaaggttcaagagta 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 cgccaattgtcagccattatagatcagggggaaaacgctgcctatgaaggttcaagagta 305
Query: 759 gatgcaattaacatacccgatccacctccacaaccagacttgaatgtggaacatgaaaca 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gatgcaattaacatacccgatccacctccacaaccagacttgaatgtggaacatgaaaca 365
Query: 819 gtaccgcccataaactttcttccaaaacaatactgtgacttttcccttggaagaggtcca 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gtaccgcccataaactttcttccaaaacaatactgtgacttttcccttggaagaggtcca 425
Query: 879 gtaattctaccatttactccagaaagccataaccgtgcactgaaacaatgtgcagcaata 938
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 426 gtaattctaccatttactccagaaagccataaccgtgccctgaaacaatgtgcagcaata 485
Query: 939 tccattggacatgtaggctttgcatttagcaccaatacagcactggctgccgtggcagat 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tccattggacatgtaggctttgcatttagcaccaatacagcactggctgccgtggcagat 545
Query: 999 gctctagacatttacatgacaaatatgtgtaaattattaaggactattgttgaccgagat 1058
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 546 gctctagacatttacatgacaaatatgtgtaaattattaaggactattgttgacagagat 605
Query: 1059 gccagtgggctaaaatcaggcttcccagacaccatttctaaattgtttgcagatctcaat 1118
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 606 gccagtgggctaaaatcgggcttcccagataccatttctaaattgtttgcagatctcaat 665
Query: 1119 gtgggaaatcttcaagatttttatgaaactcgcattgtgaggtaccatgctaagataaaa 1178
|| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 666 gtaggaaaccttcaagatttttatgnnnctcgcattgtgaggtaccatgctaagataaaa 725
Query: 1179 aataaatgtgaagatttgagaaaccaatgtgaagcactggctattggtgatatagc 1234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 aataaatgtgaagatttgagaaaccaatgtgaagcactggctattggtgatatagc 781
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 359,282
Number of extensions: 14111
Number of successful extensions: 14111
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 14111
Number of HSP's successfully gapped: 1
Length of query: 1981
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1964
Effective length of database: 8,119,229
Effective search space: 15946165756
Effective search space used: 15946165756
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)