BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00802 (UTR included)
(1645 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01050B2F12 1300 0.0
BF14_533_C1 172 1e-42
BF01044B2F02 125 2e-28
>BF01050B2F12
Length = 727
Score = 1300 bits (656), Expect = 0.0
Identities = 695/708 (98%)
Strand = Plus / Plus
Query: 509 aaaattgtaccactttaatgttagcactccttcacgaggggcgttgttatccgcgaaatt 568
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1 aaaattgtaccactttaatgttagcactccttcacgaggggcgttgttatctgcgaaatt 60
Query: 569 gttagatgtaccagtcgaagttgttatcatagacttaatgaaaaaagaacaactgaaaga 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttagatgtaccagtcgaagttgttatcatagacttaatgaaaaaagaacaactgaaaga 120
Query: 629 atctttcatcaaaataaatcctcaacattgtgtgccaacacttgaagataacggttttgt 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atctttcatcaaaataaatcctcaacattgtgtgccaacacttgaagataacggttttgt 180
Query: 689 gatatgggaaagccgggcaatagcctgctatttggctgataaatacggtaaaaacgacga 748
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 181 gatatgggaaagccgggcaatagcctgctatttggctgataaatacgggaaaaacgacga 240
Query: 749 tcactacccgaaagatcttcaacgccgtgctattgtaaactcaagactttatttcgatag 808
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcactacccgaaagatcttcagcgccgtgctattgtaaactcaagactttatttcgatag 300
Query: 809 ttcatttttgtaccccagactcagggctatttgttaccctattttatttgaaggcgtgaa 868
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 301 ttcatttttgtaccccagactcagggctatttgttatcctattttatttgaaggtgtgac 360
Query: 869 agaaattaaggataaattaagaaatgatttgaatgcgacacttggtttcttaaatcaatt 928
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 361 ggaaattaaggataaattaagaaatgatttgaatgcaacacttggtttcttaaatcaatt 420
Query: 929 tttggaagaccagaagtgggttgctggtgacaagcccactatagcagatacagccattct 988
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 421 tttggaagatcagaagtgggttgctggtgacaagcccactatagcggatacagccattct 480
Query: 989 agcatcctttagttctgtagttgaacttggttgggatcttagccaattccctaatattga 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agcatcctttagttctgtagttgaacttggttgggatcttagccaattccctaatattga 540
Query: 1049 gagatggtacaaagaatgcagtattctgccaggttatgaagagaatcttgagggagctag 1108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gagatggtacaaagaatgcagtattctgccaggttatgaagagaatcttgagggagctag 600
Query: 1109 agcatttgccggattggttaagaggaacttaaaataatacatatatttatgttgataaat 1168
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agcatttgcaggattggttaagaggaacttaaaataatacatatatttatgttgataaat 660
Query: 1169 cttataatctatattttattatgattaataaattatttttttataaaa 1216
|||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 661 cttataatctatattttattatgattaataaattttttatttataaaa 708
>BF14_533_C1
Length = 811
Score = 172 bits (87), Expect = 1e-42
Identities = 87/87 (100%)
Strand = Plus / Minus
Query: 1559 attatgtttcgcagtgctgtgtgacattaagcatgctttaaaatttatatccgtactaaa 1618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 attatgtttcgcagtgctgtgtgacattaagcatgctttaaaatttatatccgtactaaa 752
Query: 1619 gcatactgtattaggaaataccatgcc 1645
|||||||||||||||||||||||||||
Sbjct: 751 gcatactgtattaggaaataccatgcc 725
>BF01044B2F02
Length = 600
Score = 125 bits (63), Expect = 2e-28
Identities = 93/105 (88%), Gaps = 8/105 (7%)
Strand = Plus / Minus
Query: 1 cttccattacaaaaacagggtatttataacatttattaattaattttattgtatatatca 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 97 cttccattacaaaaacagggtatttataacattaattaattaattttattgtat------ 44
Query: 61 acattaaaatataattgaaatgtcacccgatcacctcttaaatct 105
||||||||||| |||||||||||||||||||||||||||||
Sbjct: 43 --attaaaatatannngaaatgtcacccgatcacctcttaaatct 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 247,638
Number of extensions: 6134
Number of successful extensions: 6134
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 6134
Number of HSP's successfully gapped: 4
Length of query: 1645
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1628
Effective length of database: 8,119,229
Effective search space: 13218104812
Effective search space used: 13218104812
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)