BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00803 (UTR included)
(2224 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2437_C1 1905 0.0
>BF14_2437_C1
Length = 1001
Score = 1905 bits (961), Expect = 0.0
Identities = 992/1001 (99%), Gaps = 1/1001 (0%)
Strand = Plus / Minus
Query: 375 tttttgagccaacagtttcaacgagttgttaagttaaggaattaattgatgaacaaatta 434
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1000 tttttgagcca-cagtttcaacgagttgttaagttaaggaattaattgatgaacaaatta 942
Query: 435 ttctctaaagtattcccatttcgtaccattggtaaattattatcgacacttactcctgga 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 ttctctaaagtattcccatttcgtaccattggtaaattattatcgacacttactcctgga 882
Query: 495 ataaaaatggtgcgatattttcctaatccttacgacgactataagtcgggaattaatttg 554
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 881 ataaaaatggtgcgatattttcctaatccttacgacgactataagtcgggaactaatttg 822
Query: 555 aatattgataaggacgaggtgttgtcccagataaatgaacatattaagaatattaccaag 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 aatattgataaggacgaggtgttgtcccagataaatgaacatattaagaatattaccaag 762
Query: 615 cgcattcagccaaaccgaaaaaatgttgaaggtggcttatatgtcggcatcacgggcata 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 cgcattcagccaaaccgaaaaaatgttgaaggtggcttatatgtcggcatcacgggcata 702
Query: 675 tcgtatatgttttattacttatctcgaaatcccttactttcggagatgaagtctgagtat 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 tcgtatatgttttattacttatctcgaaatcccttactttcggagatgaagtctgagtat 642
Query: 735 attgcaaaaggactcgactatcttgcgccggcattagagacgtcagccggcgataaaacc 794
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 641 attgcaaaaggactcgactatcttgcgccggcattagagacgtcagctggcgataaaacc 582
Query: 795 tcataccttcttggcgacgccggcaccttcgcactggcgactgttttaaaaaaagaaatg 854
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 581 tcataccttcttggcgacgccggcaccttcgctctggcgactgttttaaaaaaagaaatg 522
Query: 855 ggggatgaggagttcacccatagcttaaaaacatataaatctttgtacaattattattta 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ggggatgaggagttcacccatagcttaaaaacatataaatctttgtacaattattattta 462
Query: 915 aacccaaagtttttaaagtgcggaggggacgagttttttgttggtcgtgccggttatctt 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 aacccaaagtttttaaagtgcggaggggacgagttttttgttggtcgtgccggttatctt 402
Query: 975 gccggagctttgtggataagccgtgaattgaaaactgaaatattcactccggaggaattg 1034
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 401 gccggagctttgtggataagccgtgagttgaaaactgaaatattcactccggaggaattg 342
Query: 1035 tataaaatttgcgacataattgttgcatctggccgacaatttgcatcggcacacaatagt 1094
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 341 tataaaatttgcgacataattgttgcatctggtcgtcaatttgcatcggcacacaatagt 282
Query: 1095 ccttctccattaatgtatcattattacaatactaaatatttgggagcagctcatggtagc 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ccttctccattaatgtatcattattacaatactaaatatttgggagcagctcatggtagc 222
Query: 1155 agtttcattctgcaaatgctcttatctgtacctggttatttggaatacaataaatctgca 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 agtttcattctgcaaatgctcttatctgtacctggttatttggaatacaataaatctgca 162
Query: 1215 gcccaggacataaagagcacagttgagttcatagcatctttacaaactgaggaaggcaat 1274
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 161 gcccaggacataaagagcacagttgagttcatagcatctttacaaacagaggaaggcaat 102
Query: 1275 tggccatgttgcatggaggaggttggtttatctgatcataagttagtccactggtgtcat 1334
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 tggccatgttgtatggaggaggttggtttatctgatcataagttagtccactggtgtcat 42
Query: 1335 ggagctcctgggactgtttatttgatggccaaagcatacct 1375
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 ggagctcctgggactgtttatttgatggccaaagcatacct 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 310,124
Number of extensions: 6762
Number of successful extensions: 6762
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6762
Number of HSP's successfully gapped: 1
Length of query: 2224
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2207
Effective length of database: 8,119,229
Effective search space: 17919138403
Effective search space used: 17919138403
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)