BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00811 (UTR included)
(3004 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_478_C1 1675 0.0
>BF14_478_C1
Length = 914
Score = 1675 bits (845), Expect = 0.0
Identities = 876/883 (99%), Gaps = 3/883 (0%)
Strand = Plus / Plus
Query: 2125 ccgatcatgtgaaagccctagtactgttgggagacatttacatcaattcggtcaaggatt 2184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ccgatcatgtgaaagccctagtactgttgggagacatttacatcaattcggtcaaggatt 61
Query: 2185 tggatgctgctgaaagttgctatcgacgcatcctcgaactagaaccagacaacgtgcaag 2244
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 62 tggatgctgctgaaagttgctatcgacgcatcctcgaactggaaccagacaacgtgcaag 121
Query: 2245 ctctccacaatttatgcgttgttgctgtagaaagagggaagttagccgttgctgaagagt 2304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ctctccacaatttatgcgttgttgctgtagaaagagggaagttagccgttgctgaagagt 181
Query: 2305 gtcttacaagagccgcggttttggcgccacacgaacattacatacagcgccatctagcgg 2364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gtcttacaagagccgcggttttggcgccacacgaacattacatacagcgccatctagcgg 241
Query: 2365 tagtacgcgcgagactggcagctgtctcgctcacacaccccaacacccgaccatccgacg 2424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tagtacgcgcgagactggcagctgtctcgctcacacaccccaacacccgaccatccgacg 301
Query: 2425 catccgacgcacaagtgcgagcgagatggaactacatcccccaacaaccccccgacccac 2484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 catccgacgcacaagtgcgagcgagatggaactacatcccccaacaaccccccgacccac 361
Query: 2485 acgagtcggatccctcatagcgaacttgtgcgaaatgtaaa-taggtctaacac-cattt 2542
||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 362 acgagtcggatccctcatagcgaacttgtgcgaaatgtaaagtaggtctaacacacattt 421
Query: 2543 taatatgatttgcttatacaatcagggtatttgctttttgatttgtacttgtcggttttg 2602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 taatatgatttgcttatacaatcagggtatttgctttttgatttgtacttgtcggttttg 481
Query: 2603 ctctataaacatttgattttactattcaaatcgaagcgatcggttttatttgatctcgta 2662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ctctataaacatttgattttactattcaaatcgaagcgatcggttttatttgatctcgta 541
Query: 2663 gacggtaatttgcttgacattcggtgatattttatatttaatctttatgtaatatttgtg 2722
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 aacggtaatttgcttgacattcggtgatattttatatttaatctttatgtaatatttgtg 601
Query: 2723 taggac-aatcatgatggaacgagctttcctcattagcctggtatacggataatttgtgt 2781
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 taggacgaatcatgatggaacgagctttcctcattagcctggtatacggataatttgtgt 661
Query: 2782 atatttaaaatgaaaatagaatactagaaaagacttaactgtttaatgagtgtgtcgtca 2841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 atatttaaaatgaaaatagaatactagaaaagacttaactgtttaatgagtgtgtcgtca 721
Query: 2842 taagacagtactttgaaaccagtcgaatttttattatagtctattatttcagtacgtaaa 2901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 taagacagtactttgaaaccagtcgaatttttattatagtctattatttcagtacgtaaa 781
Query: 2902 ttatgctgttataggtaatgtttaaatactcccgagcttttttaggcgttgggaaatagc 2961
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 782 ttatgctgttataggtaatgtttaaatactcccgagcttttttaggcnntgggaaatagc 841
Query: 2962 gttagagaagagccccgcatttatatggcaaccccgtacataa 3004
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 gttagagaagagccccgcatttatatggcaaccccgtacataa 884
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 285,616
Number of extensions: 5062
Number of successful extensions: 5062
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5059
Number of HSP's successfully gapped: 1
Length of query: 3004
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2986
Effective length of database: 8,109,745
Effective search space: 24215698570
Effective search space used: 24215698570
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)