BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00828 (UTR included)
(1405 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_652_C1 293 4e-79
BF14_729_C2 84 7e-16
BF01033B1B03 82 3e-15
BF14_729_C3 82 3e-15
BF01025A1D01 78 4e-14
BF01017A2H11 76 2e-13
BF01011A1H06 76 2e-13
BF01012A2C11 72 3e-12
BF01012B1C01 70 1e-11
BF01035X1C09 68 4e-11
BF01005B1E12 68 4e-11
BF01024A1H07 68 4e-11
>BF14_652_C1
Length = 2299
Score = 293 bits (148), Expect = 4e-79
Identities = 151/152 (99%)
Strand = Plus / Plus
Query: 1254 ctcaatattttctggccttcgtagatatagtgatctagctatctctgttacatagataaa 1313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 ctcaatattttctggccttcgtagatatagtgatctagctatctctgttacatagataaa 72
Query: 1314 aatattatttattgctagaagtgctatcttatgattgatctaacatcgagtagcgtcttt 1373
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 73 aatattatttattgctagaagtgctatcttatgattgatctaacatcgagtagcgttttt 132
Query: 1374 aggtaagagtatgtcaatggcgtgttgtaatt 1405
||||||||||||||||||||||||||||||||
Sbjct: 133 aggtaagagtatgtcaatggcgtgttgtaatt 164
>BF14_729_C2
Length = 1289
Score = 83.8 bits (42), Expect = 7e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 177 atactcccgacggttcggttactttgcagcaaccgtgatcacgggcggacgaga 230
|||||||||||| |||||||||||| |||||||||||||||||||| |||||||
Sbjct: 581 atactcccgacgtttcggttacttttcagcaaccgtgatcacgggcagacgaga 528
>BF01033B1B03
Length = 826
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 166 tttttaacgatatactcccgacggttcggttactttgcagcaaccgtgatcacgggcgga 225
|||||||| ||||||||||||| |||||||||||||||||||||||||||| ||| ||
Sbjct: 163 tttttaacaatatactcccgacttttcggttactttgcagcaaccgtgatcataggcaga 222
Query: 226 cgaga 230
|||||
Sbjct: 223 cgaga 227
>BF14_729_C3
Length = 2041
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 181 tcccgacggttcggttactttgcagcaaccgtgatcacgggcggacgag 229
|||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1637 tcccgacgtttcggttactttgcagcaaccgtgatcacgggcagacgag 1589
>BF01025A1D01
Length = 764
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 180 ctcccgacggttcggttactttgcagcaaccgtgatcacgggcggacgaga 230
||||||||| |||||||||||| |||||||||||||||||||| |||||||
Sbjct: 434 ctcccgacgtttcggttacttttcagcaaccgtgatcacgggcagacgaga 484
>BF01017A2H11
Length = 713
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 177 atactcccgacggttcggttactttgcagcaaccgtgatcacgggcggacgaga 230
|||||||||||| || ||||||||| |||||||||||||||||||| |||||||
Sbjct: 86 atactcccgacgttttggttacttttcagcaaccgtgatcacgggcagacgaga 33
>BF01011A1H06
Length = 739
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 177 atactcccgacggttcggttactttgcagcaaccgtgatcacgggcggacgaga 230
|||||||||||| |||||||||||| ||| |||||||||||||||| |||||||
Sbjct: 513 atactcccgacgtttcggttacttttcagtaaccgtgatcacgggcagacgaga 460
>BF01012A2C11
Length = 780
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 180 ctcccgacggttcggttactttgcagcaaccgtgatcacg 219
||||||||| ||||||||||||||||||||||||||||||
Sbjct: 254 ctcccgacgtttcggttactttgcagcaaccgtgatcacg 293
>BF01012B1C01
Length = 950
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 179 actcccgacggttcggttactttgcagcaaccgtgatcacgggcggacgag 229
|||||||||| |||||||||||||||||| |||||||||||| | ||||||
Sbjct: 704 actcccgacgtttcggttactttgcagcagccgtgatcacggacagacgag 654
>BF01035X1C09
Length = 778
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 181 tcccgacggttcggttactttgcagcaaccgtgatcacgggcggacgaga 230
|||| ||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 615 tcccaacgtttcggttactttgcagcaaccgtgatcacgggaagacgaga 664
>BF01005B1E12
Length = 657
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 181 tcccgacggttcggttactttgcagcaaccgtgatcacgggcggacgaga 230
|||||| | ||||||||||||||||||||||||||||||| | |||||||
Sbjct: 352 tcccgaggtttcggttactttgcagcaaccgtgatcacggccagacgaga 303
>BF01024A1H07
Length = 726
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 185 gacggttcggttactttgcagcaaccgtgatcacgggcggacgaga 230
|||| |||||||||||| |||||||||||||||||||| |||||||
Sbjct: 692 gacgtttcggttacttttcagcaaccgtgatcacgggcagacgaga 647
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 241,355
Number of extensions: 22278
Number of successful extensions: 22278
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 22278
Number of HSP's successfully gapped: 12
Length of query: 1405
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1388
Effective length of database: 8,119,229
Effective search space: 11269489852
Effective search space used: 11269489852
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)