BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00849 (UTR included)
(2302 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2913_C1 1871 0.0
>BF14_2913_C1
Length = 975
Score = 1871 bits (944), Expect = 0.0
Identities = 947/948 (99%)
Strand = Plus / Plus
Query: 480 agataaagtgaaatttttaaaatgacggatatagaaaaattgcctctagaaacattaata 539
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 28 agataaagtgaaatttttaaaatgacggatatagaaaaactgcctctagaaacattaata 87
Query: 540 gaaatattaacaaaaattgatgggaaatcattaggtcgaagtcgtcgtgtgtgtcgaaaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 gaaatattaacaaaaattgatgggaaatcattaggtcgaagtcgtcgtgtgtgtcgaaaa 147
Query: 600 tggaaggaatgtatagatggggtagacagtttgtggcagaaattgtgcgaaaaagacttc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 tggaaggaatgtatagatggggtagacagtttgtggcagaaattgtgcgaaaaagacttc 207
Query: 660 cccgaatcttcgaggatcgctaaaagaaaaagcgggaccagctttaaatggtaccacatt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 cccgaatcttcgaggatcgctaaaagaaaaagcgggaccagctttaaatggtaccacatt 267
Query: 720 tatcgcaacctcataatgtgggcagacatatcaagatttgaaacagatgttaaagaattt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tatcgcaacctcataatgtgggcagacatatcaagatttgaaacagatgttaaagaattt 327
Query: 780 tataaattttcaatacacgataaaacgcacctccttgaaatagattatggcgtattagct 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tataaattttcaatacacgataaaacgcacctccttgaaatagattatggcgtattagct 387
Query: 840 ctcagtgatcttaaagggttggtattatatgatgtgagtacacttaaatatattcctgtg 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ctcagtgatcttaaagggttggtattatatgatgtgagtacacttaaatatattcctgtg 447
Query: 900 tcaatacctgatggtttctgttcaaaaatgagtaacaatgatcatgcaactataatccta 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tcaatacctgatggtttctgttcaaaaatgagtaacaatgatcatgcaactataatccta 507
Query: 960 actagaacaggtgttatagtacaaagatcagcgaatctcacacctgaagacgagcaatac 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 actagaacaggtgttatagtacaaagatcagcgaatctcacacctgaagacgagcaatac 567
Query: 1020 ttacgtgctgatgattttatactcaccgaagatcatttttacatacatagaaatcgtgat 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 ttacgtgctgatgattttatactcaccgaagatcatttttacatacatagaaatcgtgat 627
Query: 1080 gtattcagatgtgattacaatgcacaaaatctggaccccgaactgatcatgcattgtcaa 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gtattcagatgtgattacaatgcacaaaatctggaccccgaactgatcatgcattgtcaa 687
Query: 1140 tacaaaatcaaaactatggtgcattacaatggttcactacaaatattcacggattgtggt 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 tacaaaatcaaaactatggtgcattacaatggttcactacaaatattcacggattgtggt 747
Query: 1200 aaagttgttaccataaataaaaataatgaagttaaagtcaatccgatcagttgtccagcg 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 aaagttgttaccataaataaaaataatgaagttaaagtcaatccgatcagttgtccagcg 807
Query: 1260 gaatggattccgcagatcaaacatatatctgcggtcaatgataaaaactttgtatgttat 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 gaatggattccgcagatcaaacatatatctgcggtcaatgataaaaactttgtatgttat 867
Query: 1320 tcaagaaatttaatcaaagtcgagactaataaatataagcatctctatttggattttccg 1379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 tcaagaaatttaatcaaagtcgagactaataaatataagcatctctatttggattttccg 927
Query: 1380 ccgataactgcattattcttctacgtcgatataattttgatcggcacc 1427
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 ccgataactgcattattcttctacgtcgatataattttgatcggcacc 975
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 294,981
Number of extensions: 5883
Number of successful extensions: 5883
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5883
Number of HSP's successfully gapped: 1
Length of query: 2302
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2285
Effective length of database: 8,119,229
Effective search space: 18552438265
Effective search space used: 18552438265
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)