BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00875 (UTR included)
(2629 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01026B1A11 1376 0.0
>BF01026B1A11
Length = 725
Score = 1376 bits (694), Expect = 0.0
Identities = 719/725 (99%), Gaps = 2/725 (0%)
Strand = Plus / Plus
Query: 1481 gaagccgccgacgaagcccttcacgaacggcctcaacggccccgaggcctacccggccgg 1540
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaagccgcctangaagcccttcacgaacggcctcaacggccccgaggcctacccggccgg 60
Query: 1541 ctacccgttctggtcgggcgctccgcccttcagacacgcgcccgacctgtacgcctcgca 1600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctacccgttctggtcgggcgctccgcccttcagacacgcgcccgacctgtacgcctcgca 120
Query: 1601 catgatgcggcgcttgcaggaggaggcgccgccgcccgccaacggctccttcctcgaggg 1660
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 121 catgatgcggcgcttgcaggaggaggtgccgccgcccgccaacggctccttcctcgaggg 180
Query: 1661 catcatcaggtccagcctggagcggcccggcgccgccctgctgcagcggctgggagcacc 1720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 catcatcaggtccagcctggagcggcccggcgccgccctgctgcagcggctgggagcacc 240
Query: 1721 cgcctcgccccccgcccccggccccggtcctggccccggacccggccccggcgcggcggg 1780
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgcctcgccccccgccgccggccccggtcctggccccggacccggccccggcgcggcggg 300
Query: 1781 tgacgcactgcgccggcgaccggacgccgcggacgagtcggccgccaagagaccgcgcct 1840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgacgcactgcgccggcgaccggacgccgcggacgagtcggccgccaagagaccgcgcct 360
Query: 1841 cgacaccgaccaccagctggcggccgacatgagggaggcggtgcagaggctgcgggcgga 1900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgacaccgaccaccagctggcggccgacatgagggaggcggtgcagaggctgcgggcgga 420
Query: 1901 caagatgaggcccaggaacggcaccccc-ccccgccccccgcaccgcccgcccaggagag 1959
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 421 caagatgaggcccaggaacggcacccccaccccgccccccgcaccgcccgcccaggagag 480
Query: 1960 ggtctagcctcaccgggcaccgacatcacaatagttaccttacacacacacacacagaga 2019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggtctagcctcaccgggcaccgacatcacaatagttaccttacacacacacacacagaga 540
Query: 2020 cgacacaccggacggaggcgcccggcggaccagcaccggcacactccccccccga-cccc 2078
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 541 cgacacaccggacggaggcgcccggcggaccagcaccggcacactccccccccgaccccc 600
Query: 2079 cgaccggcccggcccggcccggagaccctcggtgcagacctcgttatgtaagagacaacc 2138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cgaccggcccggcccggcccggagaccctcggtgcagacctcgttatgtaagagacaacc 660
Query: 2139 aaaagttaatgttatgaaatcgactatttaaatattttttaagtaattaaaaataaaaat 2198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aaaagttaatgttatgaaatcgactatttaaatattttttaagtaattaaaaataaaaat 720
Query: 2199 aaaaa 2203
|||||
Sbjct: 721 aaaaa 725
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 243,017
Number of extensions: 5930
Number of successful extensions: 5930
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5922
Number of HSP's successfully gapped: 1
Length of query: 2629
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2612
Effective length of database: 8,119,229
Effective search space: 21207426148
Effective search space used: 21207426148
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)