BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00876 (UTR included)
(4344 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3356_C1 1445 0.0
BF01011A2A03 281 5e-75
>BF14_3356_C1
Length = 1298
Score = 1445 bits (729), Expect = 0.0
Identities = 747/753 (99%)
Strand = Plus / Plus
Query: 988 ttatagcgcggtcaggtagtgttcttttgcatttcttctctgacgatgcttacgccatgg 1047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttatagcgcggtcaggtagtgttcttttgcatttcttctctgacgatgcttacgccatgg 60
Query: 1048 aaggttttaatgtcacctacgatgcctactcctgcccatccaacgaccacaggaccaact 1107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaggttttaatgtcacctacgatgcctactcctgcccatccaacgaccacaggaccaact 120
Query: 1108 gttccgatcacggcgagtgcgaggaaggttcctgtcggtgtgacgatgactggctcgggg 1167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttccgatcacggcgagtgcgaggaaggttcctgtcggtgtgacgatgactggctcgggg 180
Query: 1168 tagcctgtgaccagcctttgtgtcccaacgactgtaacgctatgtacggagctgggtcgt 1227
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 181 tagcctgtgaccagcctttgtgtcccaacgactgtaacgctatgtacggagctggttcgt 240
Query: 1228 gtacgtcgtctggctgcgtgtgcacgccgtccaagactggagcagattgcagccgggacg 1287
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 241 gtacgtcgtctggttgcgtgtgcacgccgtccaagactggagcggattgcagccgggacg 300
Query: 1288 cgtttatatccggctgggggtgggcgtggcgggaggagggggaggggggtgaacgcccgc 1347
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 301 cgtttatatccggctgggggtgggcgtggcgggaggagggggaggggggtgaacgaccgc 360
Query: 1348 ggaacatgccgccgccgacagctgggcacgtgcttgtcaactatggtgacgatataataa 1407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaacatgccgccgccgacagctgggcacgtgcttgtcaactatggtgacgatataataa 420
Query: 1408 tggtgggaggggaaatgttccaagacgcagcgtttatgtacagatataaaccgagcctta 1467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tggtgggaggggaaatgttccaagacgcagcgtttatgtacagatataaaccgagcctta 480
Query: 1468 aggagtggaaggtagttgaggcccggggcaaggcgccacagatgcggttcgcccacacgg 1527
|||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 481 aggagtggaaggtagtcgaggcgcggggcaaggcgccacagatgcggttcgcccacacgg 540
Query: 1528 ccatagtccacggcgaggagatcatagtgtatggcggggtggtggtcaccgacgagctgg 1587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ccatagtccacggcgaggagatcatagtgtatggcggggtggtggtcaccgacgagctgg 600
Query: 1588 agaggagcgggggtctcgcgggggtggaggggcgggcggcgttcgtcagcaacgagatct 1647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agaggagcgggggtctcgcgggggtggaggggcgggcggcgttcgtcagcaacgagatct 660
Query: 1648 ggacgggtcggctgtcggggggcttcgtccactggaccaacgacacgccgcggacgtgct 1707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ggacgggtcggctgtcggggggcttcgtccactggaccaacgacacgccgcggacgtgct 720
Query: 1708 ctcctcaccaccccgcgccgttcgaccactgcg 1740
|||||||||||||||||||||||||||||||||
Sbjct: 721 ctcctcaccaccccgcgccgttcgaccactgcg 753
Score = 1366 bits (689), Expect = 0.0
Identities = 692/693 (99%)
Strand = Plus / Plus
Query: 1938 agcgggggtctcgcggggatggaggggcgggcggcgttcgtcagcaacgagatctggacg 1997
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 agcgggggtctcgcgggggtggaggggcgggcggcgttcgtcagcaacgagatctggacg 665
Query: 1998 ggtcggctgtcggggggcttcgtccactggaccaacgacacgccgcggacgtgctctcct 2057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 ggtcggctgtcggggggcttcgtccactggaccaacgacacgccgcggacgtgctctcct 725
Query: 2058 caccaccccgcgccgttcgaccactgcggcgggctccacctgtcgggccactcgtcagtc 2117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 caccaccccgcgccgttcgaccactgcggcgggctccacctgtcgggccactcgtcagtc 785
Query: 2118 ctggtccaaatcggcccaacctccaagcccgtgatgttggtgttcttcggccactccccc 2177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 ctggtccaaatcggcccaacctccaagcccgtgatgttggtgttcttcggccactccccc 845
Query: 2178 cactacggctacctgcatctcgtacaggagtactatatagaggagaaggcgtggggcgtc 2237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 cactacggctacctgcatctcgtacaggagtactatatagaggagaaggcgtggggcgtc 905
Query: 2238 gcccggacccgcggctggccggccaggggagggttcgctcacaccgctgtatgggacgcg 2297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 906 gcccggacccgcggctggccggccaggggagggttcgctcacaccgctgtatgggacgcg 965
Query: 2298 ctcagcggcagggtgtacgtacacgctggactcgtctccgagtcggaggcgacacaggcg 2357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 966 ctcagcggcagggtgtacgtacacgctggactcgtctccgagtcggaggcgacacaggcg 1025
Query: 2358 ccgtccgccgcgctgtacgagtatgaagttgaagcacggatatggcgcccgctgccctcc 2417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1026 ccgtccgccgcgctgtacgagtatgaagttgaagcacggatatggcgcccgctgccctcc 1085
Query: 2418 gcccccacgcccagatatctacacaccgccatatttatatcgccaggggtcatgttggtg 2477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1086 gcccccacgcccagatatctacacaccgccatatttatatcgccaggggtcatgttggtg 1145
Query: 2478 ttcggggggaacgcccacaacgacagtgctgccgcggcgctcacggcctcgggcgcgtcc 2537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1146 ttcggggggaacgcccacaacgacagtgctgccgcggcgctcacggcctcgggcgcgtcc 1205
Query: 2538 cagtgctacgcggccaacgcgctgctgtactacgccaggtgtcgccagtggatgtctgcg 2597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1206 cagtgctacgcggccaacgcgctgctgtactacgccaggtgtcgccagtggatgtctgcg 1265
Query: 2598 ggcggcctgctgggctcgcctcgcgccggacac 2630
|||||||||||||||||||||||||||||||||
Sbjct: 1266 ggcggcctgctgggctcgcctcgcgccggacac 1298
Score = 234 bits (118), Expect = 1e-60
Identities = 121/122 (99%)
Strand = Plus / Plus
Query: 1773 ggcgggctccacctgtcgggccactcgtcagtcctggttcaaatcggcccaacctccaag 1832
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 753 ggcgggctccacctgtcgggccactcgtcagtcctggtccaaatcggcccaacctccaag 812
Query: 1833 cccgtgatgttggtgttcttcggccactccccccactacggctacctgcatctcgtacag 1892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 cccgtgatgttggtgttcttcggccactccccccactacggctacctgcatctcgtacag 872
Query: 1893 ga 1894
||
Sbjct: 873 ga 874
>BF01011A2A03
Length = 834
Score = 281 bits (142), Expect = 5e-75
Identities = 145/146 (99%)
Strand = Plus / Minus
Query: 2680 gcttcgacggccgccttcgctcggacgcgcttgtcttcgagtccggaatgcgctgttcgt 2739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 gcttcgacggccgccttcgctcggacgcgcttgtcttcgagtccggaatgcgctgttcgt 660
Query: 2740 ggtacaaggacgaaacgtcctgtatgaacagcgccaggcacggcgtctcgtgtgtgtggc 2799
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 659 ggtacaaggacgaaacgtcctgcatgaacagcgccaggcacggcgtctcgtgtgtgtggc 600
Query: 2800 gccttagagatatgctgtgcgtcggg 2825
||||||||||||||||||||||||||
Sbjct: 599 gccttagagatatgctgtgcgtcggg 574
Score = 127 bits (64), Expect = 2e-28
Identities = 73/76 (96%)
Strand = Plus / Minus
Query: 2825 gataaaggaagtagggtggaaggattctttcacggatgctgtaaaagcctgcatcgacga 2884
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 217 gataaaggaagtaggatggaaggattctttcacggatgctgtgaaagcctgcatcgacga 158
Query: 2885 gccagtagtcgatgag 2900
||||||||||| ||||
Sbjct: 157 gccagtagtcggtgag 142
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 368,703
Number of extensions: 7425
Number of successful extensions: 7425
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7423
Number of HSP's successfully gapped: 5
Length of query: 4344
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4326
Effective length of database: 8,109,745
Effective search space: 35082756870
Effective search space used: 35082756870
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)