BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00879 (UTR included)
(2041 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2235_C1 741 0.0
>BF14_2235_C1
Length = 833
Score = 741 bits (374), Expect = 0.0
Identities = 380/382 (99%)
Strand = Plus / Minus
Query: 1660 tatagatatttacataatgccatacttttaatattatgtgcttacataacggttgataac 1719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 tatagatatttacataatgccatacttttaatattatgtgcttacataacggttgataac 774
Query: 1720 ttaagtgcctcaatatgccttaaattaaaaaaaaaataaatctcaaactattttcttata 1779
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 773 ttaagtgcctcgatatgccttaaataaaaaaaaaaataaatctcaaactattttcttata 714
Query: 1780 tgcgctgttaatattgtaaaatgaaagtatttaattgaatggtaaatttagtgaaattat 1839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 tgcgctgttaatattgtaaaatgaaagtatttaattgaatggtaaatttagtgaaattat 654
Query: 1840 tgtggatgtatgaatatttgttgttaatgatgctggtcttagctttattaattgtaataa 1899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 tgtggatgtatgaatatttgttgttaatgatgctggtcttagctttattaattgtaataa 594
Query: 1900 caatttgtatagtatttaattgtaacctcggccaagtcctattgaatttttcggcatgac 1959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 caatttgtatagtatttaattgtaacctcggccaagtcctattgaatttttcggcatgac 534
Query: 1960 aatatgtaattatttcattatatttggcataatacataacaccttacaaaggtaactggg 2019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 aatatgtaattatttcattatatttggcataatacataacaccttacaaaggtaactggg 474
Query: 2020 attacgttgagtgagtcaatgg 2041
||||||||||||||||||||||
Sbjct: 473 attacgttgagtgagtcaatgg 452
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 313,424
Number of extensions: 7020
Number of successful extensions: 7020
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7018
Number of HSP's successfully gapped: 1
Length of query: 2041
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2024
Effective length of database: 8,119,229
Effective search space: 16433319496
Effective search space used: 16433319496
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)