BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00880 (UTR included)
(1252 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_934_C1 1505 0.0
BF01033B2D03 192 9e-49
>BF14_934_C1
Length = 858
Score = 1505 bits (759), Expect = 0.0
Identities = 801/818 (97%)
Strand = Plus / Plus
Query: 435 taagctttaccggccgaagaaggtcgtgtatacttaatattgtaaataaaagttgaatac 494
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 taagctttaccggccgaagaaggtcgtgtatacttaatattgtaaataaaagttaaatac 60
Query: 495 agtataatggctgaacaaagtacagatatcaaagtttctgaagttgaaaacaattatagt 554
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 annnnnatggctgaacaaagtacagatatcaaagtttctgaagttgaaaacaattatagt 120
Query: 555 actccagctaacgatcctaaaaatatgcaagagatcacgcagtatgttcaatcgcttatg 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 actccagctaacgatcctaaaaatatgcaagagatcacgcagtatgttcaatcgcttatg 180
Query: 615 caaaatatgcaagacaaattccaaagcatgtcagatcaaataatcaacaggatggatgag 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caaaatatgcaagacaaattccaaagcatgtcagatcaaataatcaacaggatggatgag 240
Query: 675 atgggtacaagggtcgatgaactcgagaagaacatcaccgatttgatgacacaagctgga 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgggtacaagggtcgatgaactcgagaagaacatcaccgatttgatgacacaagctgga 300
Query: 735 attgaaaatgaaaagtagtgaatagacaatgccactttttaaaacaaagaaacaacagtt 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 attgaaaatgaaaagtagtgaatagacaatgccactttttaaaacaaagaaacaacagtt 360
Query: 795 ggtaatgcacacattattatttgtgatgtcataaaacctagttttttaaattattgtcct 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggtaatgcacacattattatttgtgatgtcataaaacctagttttttaaattattgtcct 420
Query: 855 taatctagctgcttttattttattcagatataatatatgtattttatgtactcgatattg 914
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 421 taatctagctgcttttattttattcagatataatatatgtatttaatgtactcgatattg 480
Query: 915 aaatttatagagtcaagaaccaccataagtatcaaatgaattactcattagatacttatg 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 481 aaatttatagagtcaagaaccaccataagtatcaaatgaattactcattagatacatatg 540
Query: 975 gagattccagtacgcttaatttagatattttttctaacactcatgttatatagagtaatg 1034
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 541 gagattccagtacgcttaatttagatattttttcgaacactcatgttatatagagtaatg 600
Query: 1035 gtgctttcgattccattgtttgtattagttgagtaaattttttatatctttataaaaacg 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtgctttcgattccattgtttgtattagttgagtaaattttttatatctttataaaaacg 660
Query: 1095 aataacccaaatatcttttgtaagaccaaaaaatatcattaaaaatgtatgtttgtgctt 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aataacccaaatatcttttgtaagaccaaaaaatatcattaaaaatgtatgtttgtgctt 720
Query: 1155 taatattaactaactgaaatatgatgcaaatgtcaggcaagaatatgccatttaaattga 1214
|||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 721 taatattacctaactgaaatatgatgcaaatgtcaggcaagaatactccatttaaattga 780
Query: 1215 gcatacggcactatgaagcttaaaggcccattcactaa 1252
||||| |||||||||||||||| ||||||||||||
Sbjct: 781 gcatatggcactatgaagcttannnncccattcactaa 818
>BF01033B2D03
Length = 826
Score = 192 bits (97), Expect = 9e-49
Identities = 106/109 (97%)
Strand = Plus / Plus
Query: 1144 tgtttgtgctttaatattaactaactgaaatatgatgcaaatgtcaggcaagaatatgcc 1203
||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 10 tgtttgtgctttaatattacctaactgaaatatgatgcaaatgtcaggcaagaatactcc 69
Query: 1204 atttaaattgagcatacggcactatgaagcttaaaggcccattcactaa 1252
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 atttaaattgagcatacggcactatgaagcttaaaggcccattcactaa 118
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 190,042
Number of extensions: 4180
Number of successful extensions: 4180
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4178
Number of HSP's successfully gapped: 2
Length of query: 1252
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1235
Effective length of database: 8,119,229
Effective search space: 10027247815
Effective search space used: 10027247815
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)