BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00885 (UTR included)
(4116 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01041A1A05 1394 0.0
>BF01041A1A05
Length = 727
Score = 1394 bits (703), Expect = 0.0
Identities = 721/727 (99%)
Strand = Plus / Plus
Query: 1997 attcgcgtccatactgtatccagttttacccgacgtgtgtgttgatttgtgtcaaatgtt 2056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attcgcgtccatactgtatccagttttacccgacgtgtgtgttgatttgtgtcaaatgtt 60
Query: 2057 aaaacaagattttaagtatcatgtcaggaagaaggatcaaattaacattgaatcaaagat 2116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaacaagattttaagtatcatgtcaggaagaaggatcaaattaacattgaatcaaagat 120
Query: 2117 aaaagtggtgaggtttattggagaacttgttaaatttggtctctactccaaaatggaagc 2176
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaagtggtgaggtttattggggaacttgttaaatttggtctctactccaaaatggaagc 180
Query: 2177 tttgtactgtctgaaagttctgttacacgattttaaacatcatcacattgaaatggcttg 2236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 181 tttgtactgtctgaaagttctgttacacgattttaaacatcatcacattgaaatggcctg 240
Query: 2237 taacttattggagacttgcggaaggtatttgtactgcaatcctgatacacaccaaagaac 2296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taacttattggagacttgcggaaggtatttgtactgcaatcctgatacacaccaaagaac 300
Query: 2297 gatgatatatttacagcagatgatgagaaaaaagactgtttctgctctcgattcacgtta 2356
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 301 gatgatatatttacagcagatgatgagaaaaaagaccgtttcagctctcgattcacgtta 360
Query: 2357 cgtgacccaaatcgaaaatgcattttattacgtatgtccacccgaagcaccggcacaacc 2416
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 361 cgtgacccaaatcgaaaatgcattttattacgtatgtccacctgaagcaccggcacaacc 420
Query: 2417 gaaagaggaagagcctcccatgcaccagttcattagaaaaattcttcacgaagatctaca 2476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaaagaggaagagcctcccatgcaccagttcattagaaaaattcttcacgaagatctaca 480
Query: 2477 aaaaagtaacgaagaaaaaattttgaggcttatgaggaaacttaattgggatgaccctga 2536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaaaagtaacgaagaaaaaattttgaggcttatgaggaaacttaattgggatgaccctga 540
Query: 2537 agtagcggcagtggcaatccaacatctggctggcgggtggagagtcagggcgagtgcgag 2596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agtagcggcagtggcaatccaacatctggctggcgggtggagagtcagggcgagtgcgag 600
Query: 2597 aagggcattggctcgcttaacagctgaactggctgcctggcaagaaaacgttgcccccgc 2656
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aagagcattggctcgcttaacagctgaactggctgcctggcaagaaaacgttgcccccgc 660
Query: 2657 tgttgttgacaccatactggaggaaattagagttactatggaagaccctcatccaaagta 2716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tgttgttgacaccatactggaggaaattagagttactatggaagaccctcatccaaagta 720
Query: 2717 caatcag 2723
|||||||
Sbjct: 721 caatcag 727
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 501,470
Number of extensions: 9958
Number of successful extensions: 9958
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9958
Number of HSP's successfully gapped: 1
Length of query: 4116
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4098
Effective length of database: 8,109,745
Effective search space: 33233735010
Effective search space used: 33233735010
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)