BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00898 (UTR included)
(2916 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2270_C1 2014 0.0
>BF14_2270_C1
Length = 2078
Score = 2014 bits (1016), Expect = 0.0
Identities = 1043/1053 (99%)
Strand = Plus / Plus
Query: 1822 agcaggatgtcgtagtgagaccggtttcggtacaaagcaacggatccgcgtacagcgaca 1881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1026 agcaggatgtcgtagtgagaccggtttcggtacaaagcaacggatccgcgtacagcgaca 1085
Query: 1882 atgaactctggcagagtgaaataaaaaacaaaatggaattgtcacagataagattgacgg 1941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1086 atgaactctggcagagtgaaataaaaaacaaaatggaattgtcacagataagattgacgg 1145
Query: 1942 ctctcaaacaacagcagaagagattgcttaaatatcaggctgaagccaagcagcagttag 2001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1146 ctctcaaacaacagcagaagagattgcttaaatatcaggctgaagccaagcagcagttag 1205
Query: 2002 aagaactgaataaggagcgccaaacccaggagatacatcatccatcgacatcacacgaca 2061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1206 aagaactgaataaggagcgccaaacccaggagatacatcatccatcgacatcacacgaca 1265
Query: 2062 acttcgctggaatgcagaacatgacaataaatgcaaattatcacccacaaaaccgtatgt 2121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1266 acttcgctggaatgcagaacatgacaataaatgcaaattatcacccacaaaaccgtatgt 1325
Query: 2122 acgccacgaacccaatcggggtggccacgactctgccgcaggcggacatgacgtcacaga 2181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1326 acgccacgaacccaatcggggtggccacgactctgccgcaggcggacatgacgtcacaga 1385
Query: 2182 tgacgtcacacatgatagacaacgaccgggcgcacgccattcacgatggtttcctcctaa 2241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1386 tgacgtcacacatgatagacaacgaccgggcgcacgccattcacgatggtttcctcctaa 1445
Query: 2242 gggatggcaacgctggcagtgaggaagctctgtgttcggaagacgaggcagccggaggac 2301
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1446 gggatggcaacactggcagtgaggaagctctgtgttcggaagacgaggcagccggaggac 1505
Query: 2302 ggctgagggaacaactacggggcctccgagctaagaaggttcacatggaaaatctggttt 2361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1506 ggctgagggaacaactacggggcctccgagctaagaaggttcacatggaaaatctggttt 1565
Query: 2362 ccgagtttcaaaaacttcaaatggtgacacgtctcggcagctctcacaacgcgtactcga 2421
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 1566 ccgagtttcaaaaacttcaaatggtgacacgtctcggcagctctcgcaacgcgtactcaa 1625
Query: 2422 gttcaggcgaagacagcgctgaagacgaaccgtcccataaatgtaacaaatcaggagtca 2481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1626 gttcaggcgaagacagcgctgaagacgaaccgtcccataaatgtaacaaatcaggagtca 1685
Query: 2482 acgtgaaaaatgacgacccattcaaactcatggaaataaaagctataaagacagctttac 2541
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1686 acgtgaaaaatgacgacccattcaaactcatggaaatcaaagctataaagacagctttac 1745
Query: 2542 aaaagactaaagatctgatgaggtcagtggagacgtttgaagctgatcacctctccggag 2601
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 1746 aaaagactaaagatctgatgaggtcggtggaaacgtttgaagctgatcacctctccggag 1805
Query: 2602 tcaacgaggagaccttccatgcgccgaaccattccaacatacacgacaataaatctgaag 2661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1806 tcaacgaggagaccttccatgcgccgaaccattccaacatacacgacaataaatctgaag 1865
Query: 2662 gcggcggcagtatgggcgattggtctaacgacgcaaacgaaggaagcgtttgtcgcgtta 2721
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 1866 gcggcggcagtatgggcgattggtctaacgacgcnnncgaaggaagcgtttgtcacgtta 1925
Query: 2722 gaaacgctatcgctaggcacaagttcactaacgagcaccaacaacatcagcaacagcatc 2781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1926 gaaacgctatcgctaggcacaagttcactaacgagcaccaacaacatcagcaacagcatc 1985
Query: 2782 aacagcaacagctccatcaacaacagcggcaacaacaacaacagctgcaacaccaacaac 2841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1986 aacagcaacagctccatcaacaacagcggcaacaacaacaacagctgcaacaccaacaac 2045
Query: 2842 agtttgtacaacaacagcatatgcaacacatgc 2874
|||||||||||||||||||||||||||||||||
Sbjct: 2046 agtttgtacaacaacagcatatgcaacacatgc 2078
Score = 1253 bits (632), Expect = 0.0
Identities = 647/652 (99%)
Strand = Plus / Plus
Query: 635 gtctcggaaacaaacaaacaatacctcagatcaggaattgactgatatagacaattcagc 694
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 376 gtctcggaaacaaacaaacaatacctccgaccaggaattgactgatatagacaattcagc 435
Query: 695 ttcatacgaaggaggttttggtcgttttgtgccagttcgccctcaaccgcgtgctctgcc 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ttcatacgaaggaggttttggtcgttttgtgccagttcgccctcaaccgcgtgctctgcc 495
Query: 755 gctgacagtgcagaacagggagggtctatcggatcagcatgatgatgcagcttccacgag 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gctgacagtgcagaacagggagggtctatcggatcagcatgatgatgcagcttccacgag 555
Query: 815 ctcacatacattgcatccatacgctcatcaaatgcagaatggtttaataccacattcaaa 874
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 556 ctcacatacattgcatccatacgctcatcaaatgcagaatggtttaataccacactcaaa 615
Query: 875 ccacgcggctgcggctgttatgatagttaatccgacaactccgaatgcggtcacagggaa 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ccacgcggctgcggctgttatgatagttaatccgacaactccgaatgcggtcacagggaa 675
Query: 935 tatgaaccagcagataaatacaccaaatcagaacaggaacaatctgacaaggaatttgaa 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 tatgaaccagcagataaatacaccaaatcagaacaggaacaatctgacaaggaatttgaa 735
Query: 995 ttcgcgtaacacgttcgatggtaacgccaataacaacacaccagccgtagctcacagcag 1054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 ttcgcgtaacacgttcgatggtaacgccaataacaacacaccagccgtagctcacagcag 795
Query: 1055 gtccgggacgaagtctgtcaacctcatgaacaatatgtacgaccagggacaaggcaattt 1114
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 796 gtccgggacgaagtctgtcaacctcatgaacaatatgtacgaccagggacaaggaaattt 855
Query: 1115 caataacgtcaacgagaatcactctcacagggagtcagcccgtgcgttgggcgaggctat 1174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 caataacgtcaacgagaatcactctcacagggagtcagcccgtgcgttgggcgaggctat 915
Query: 1175 agtggcggcgtgtcctgacgcagcggcggtcgagagaagactgggacagatacgagagta 1234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916 agtggcggcgtgtcctgacgcagcggcggtcgagagaagactgggacagatacgagagta 975
Query: 1235 catacgagtgacgtcatcactcgtggacaccatgcggaactctgaggatgag 1286
|||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 976 catacgagtgacgtcatcactcgtcgacaccatgcggaactctgaggatgag 1027
Score = 624 bits (315), Expect = e-178
Identities = 318/319 (99%)
Strand = Plus / Plus
Query: 317 gcgagaagaaattgttacaattttatttattctgaaagcactgttaatacaatatattta 376
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcgagaagaaattgttacatttttatttattctgaaagcactgttaatacaatatattta 60
Query: 377 attaattcaaacaacataatttactagatctcacaaatatgtttctattaaaaatgtaaa 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attaattcaaacaacataatttactagatctcacaaatatgtttctattaaaaatgtaaa 120
Query: 437 taatattatggctgtatcagaaaagcttataaaacatttttgaattactatttaaagttt 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taatattatggctgtatcagaaaagcttataaaacatttttgaattactatttaaagttt 180
Query: 497 agtaatggcacctggtaataaagagaggcatccaggacacacgggtactatacccaaaac 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agtaatggcacctggtaataaagagaggcatccaggacacacgggtactatacccaaaac 240
Query: 557 gaaagtgcgaaacaattgcaatgtgccgcaggaggctgtaacaccaacacgacgcgacat 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaaagtgcgaaacaattgcaatgtgccgcaggaggctgtaacaccaacacgacgcgacat 300
Query: 617 ggccactaatatggtgacg 635
|||||||||||||||||||
Sbjct: 301 ggccactaatatggtgacg 319
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 337,870
Number of extensions: 7744
Number of successful extensions: 7744
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7742
Number of HSP's successfully gapped: 3
Length of query: 2916
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2898
Effective length of database: 8,109,745
Effective search space: 23502041010
Effective search space used: 23502041010
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)