BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00903 (UTR included)
(2275 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2102_C1 852 0.0
BF14_729_C3 96 3e-19
BF01011A1H06 74 1e-12
BF01049B2H03 70 2e-11
BF01012A1B09 68 7e-11
>BF14_2102_C1
Length = 1465
Score = 852 bits (430), Expect = 0.0
Identities = 456/463 (98%), Gaps = 5/463 (1%)
Strand = Plus / Plus
Query: 1506 gagcgtctgatcaagtcgtacttctacatcgtccgtaagtccatcaaggactcggttccg 1565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 gagcgtctgatcaagtcgtacttctacatcgtccgtaagtccatcaaggactcggttccg 156
Query: 1566 aaggctgtgatgcacttcctcgtgaactacgtgaaggacaacctccagtcggagctggtc 1625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 aaggctgtgatgcacttcctcgtgaactacgtgaaggacaacctccagtcggagctggtc 216
Query: 1626 actcacctgtacaagtcggaccaggccgagagtctgctcaacgagtccgagcacatcgcg 1685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 actcacctgtacaagtcggaccaggccgagagtctgctcaacgagtccgagcacatcgcg 276
Query: 1686 cagaggaggagggaggccgccgacatgctcaaggcgctccagcgagccgggcagatcatc 1745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 cagaggaggagggaggccgccgacatgctcaaggcgctccagcgagccgggcagatcatc 336
Query: 1746 agcgagatacgcgagacgcacatgtggtgatccgccg-tctagtccctagtcctagtgaa 1804
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 337 agcgagatacgcgagacgcacatgtggtgatccgccgcgctagtccctagtcctagtgaa 396
Query: 1805 gtgaactgtgaaccgactgcagtgcgagttaacacctggagaaactttgtcatgatatgt 1864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gtgaactgtgaaccgactgcagtgcgagttaacacctggagaaactttgtcatgatatgt 456
Query: 1865 atcccatgggagacgtctgatgcttgtgaatgtcacacggggtttcctgtacgggacgct 1924
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 atctcatgggagacgtctgatgcttgtgaatgtcacacggggtttcctgtacgggacgct 516
Query: 1925 cgacggctccgtccctccctccccgcacgccgcccgcccgccg 1967
||||||||||| ||||||||||||||||||||||||||||
Sbjct: 517 cgacggctccg----tccctccccgcacgccgcccgcccgccg 555
Score = 569 bits (287), Expect = e-162
Identities = 306/312 (98%), Gaps = 4/312 (1%)
Strand = Plus / Plus
Query: 1968 tcacttgttagatattttattaagtcctagatacgatgtacgggtgaggtttgtggaggt 2027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 tcacttgttagatattttattaagtcctagatacgatgtacgggtgaggtttgtggaggt 811
Query: 2028 gattgtgattcaaagatttatcttaagatatatctgcatagattcacgatttgtccggtg 2087
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 812 gattgtgattcaaagatttatcttaagatatatctgcatagattcacgatttatccggtg 871
Query: 2088 acacgtggaataattttaaattaccccgttttgattatccaacataacgaaagtatggac 2147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 acacgtggaataattttaaattaccccgttttgattatccaacataacgaaagtatggac 931
Query: 2148 aaaaatatatgtatgcaattaatttatattactatttgaaatctgtttcctgat----at 2203
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 932 aaaaatatatgtatgcaattaatttatattactatttgaaatctgtttcctgatatacat 991
Query: 2204 acatattagcaattttaatcaaatctgtacagatctcacctcactatagtctagcatcag 2263
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 992 acatattagcaattttattcaaatctgtacagatctcacctcactatagtctagcatcag 1051
Query: 2264 tgatattgtata 2275
||||||||||||
Sbjct: 1052 tgatattgtata 1063
Score = 184 bits (93), Expect = 4e-46
Identities = 96/97 (98%)
Strand = Plus / Plus
Query: 1323 ttgacacctcagaagcctgtcaacctgctgccggaagtacccagccagacctcccggaaa 1382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgacacctcagaagcctgtcaacctgctgccggaagtacccagccagacctcccggaaa 60
Query: 1383 ctgtcggaccgagagcagcatgactgcgacgtcatcg 1419
||||||||||||||||||||||||||||| |||||||
Sbjct: 61 ctgtcggaccgagagcagcatgactgcgatgtcatcg 97
>BF14_729_C3
Length = 2041
Score = 95.6 bits (48), Expect = 3e-19
Identities = 139/164 (84%), Gaps = 4/164 (2%)
Strand = Plus / Minus
Query: 136 atgagatctaagactctcgcgagtattcatttaaatgcaactaatatt-tacggata-ac 193
||||||||||||| | ||||||||||||||||||||| | ||| |||| | |||||| ||
Sbjct: 1729 atgagatctaagattttcgcgagtattcatttaaatgaagctagtattattcggatatac 1670
Query: 194 ttcgcgtattttgttattttgaa-ctacatactccc-acgtttcggttatctcgcagtaa 251
| |||| ||||| |||||| || ||||||| |||| |||||||||||| | |||| ||
Sbjct: 1669 tacgcggattttattatttaaaaactacataatcccgacgtttcggttactttgcagcaa 1610
Query: 252 ctgtgatcgcgggcagacgagatgtggatgtctgtctgttggtc 295
| |||||| |||||||||||| |||| ||||||||| |||||||
Sbjct: 1609 ccgtgatcacgggcagacgaggtgtgaatgtctgtcagttggtc 1566
>BF01011A1H06
Length = 739
Score = 73.8 bits (37), Expect = 1e-12
Identities = 71/81 (87%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 216 actacatactccc-acgtttcggttatctcgcagtaactgtgatcgcgggcagacgagat 274
||||||||||||| |||||||||||| | ||||||| |||||| ||||||||||||||
Sbjct: 518 actacatactcccgacgtttcggttacttttcagtaaccgtgatcacgggcagacgagat 459
Query: 275 gtggatgtctgtctgttggtc 295
||| |||||||| |||||||
Sbjct: 458 gtgagtgtctgtcagttggtc 438
>BF01049B2H03
Length = 832
Score = 69.9 bits (35), Expect = 2e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 134 taatgagatctaagactctcgcgagtattcatttaaatgcaactaatattt 184
||||||||||||||| | | ||||||||||||||||||| |||||||||||
Sbjct: 354 taatgagatctaagattttagcgagtattcatttaaatgaaactaatattt 304
>BF01012A1B09
Length = 841
Score = 67.9 bits (34), Expect = 7e-11
Identities = 97/112 (86%), Gaps = 7/112 (6%)
Strand = Plus / Plus
Query: 136 atgagatctaagactctcgcgag---tattcatttaaatgcaactaatat-ttacggata 191
||||||||||||||| ||||||| |||||||||||||| ||||||||| || ||||||
Sbjct: 705 atgagatctaagactgtcgcgagttttattcatttaaatgaaactaatatatttcggata 764
Query: 192 -acttcgcgtattttgttatttt-gaactacatactccc-acgtttcggtta 240
||| |||| ||||| ||||||| ||||||||| |||| ||||||||||||
Sbjct: 765 cactacgcggattttattattttaaaactacataatcccgacgtttcggtta 816
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 182,568
Number of extensions: 3520
Number of successful extensions: 3520
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 3513
Number of HSP's successfully gapped: 7
Length of query: 2275
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2258
Effective length of database: 8,119,229
Effective search space: 18333219082
Effective search space used: 18333219082
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)