BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00908 (UTR included)
(2230 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3271_C1 1768 0.0
>BF14_3271_C1
Length = 979
Score = 1768 bits (892), Expect = 0.0
Identities = 916/923 (99%), Gaps = 2/923 (0%)
Strand = Plus / Plus
Query: 1308 caggtgtggttttcaaaccgtcgagctaagtggcgtcgtgaggagaagcttaggagccaa 1367
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 36 caggtgtggttttcaaaccgtcgagctaagtggcgtcgtgaggagaagctgaggagccaa 95
Query: 1368 agaagagacgcgcccgcgtcgcccgcgcctccggctaggctgccgttgaatggcgggttc 1427
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 96 agaagagacgcgcccgcgtcgcccgcgcctccggctaggctgccgctgaatggcgggttc 155
Query: 1428 aactccatgtacagccccataccacaacctatcgccaccatgactgatacatatagttcg 1487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aactccatgtacagccccataccacaacctatcgccaccatgactgatacatatagttcg 215
Query: 1488 atgtcgtccggtctgtcgtcctcgtgtctccagcaacgtgacggtgggtatccgtacatg 1547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atgtcgtccggtctgtcgtcctcgtgtctccagcaacgtgacggtgggtatccgtacatg 275
Query: 1548 ttcggggacgtcctctcgggcggcgggtacagagcgcccgcggcacaccagcaacacgcc 1607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ttcggggacgtcctctcgggcggcgggtacagagcgcccgcggcacaccagcaacacgcc 335
Query: 1608 gcgtacagccagccacagagcgcgggcagcaccggtgtgatatcggcgggtgtgagcgtc 1667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gcgtacagccagccacagagcgcgggcagcaccggtgtgatatcggcgggtgtgagcgtc 395
Query: 1668 cccgtccaaataccttctcaggggccggacctcgcgtcgaattactggggtaggcttcag 1727
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 cccgttcaaataccttctcaggggccggacctcgcgtcgaattactggggtaggcttcag 455
Query: 1728 tgatctcagctattcgggttccctcatcgactgctctcgatggccgagaacccgaatctg 1787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tgatctcagctattcgggttccctcatcgactgctctcgatggccgagaacccgaatctg 515
Query: 1788 gccgaaacgccatctagcgagctagcgcacaactacgccgactcacacttgactgtgaac 1847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gccgaaacgccatctagcgagctagcgcacaactacgccgactcacacttgactgtgaac 575
Query: 1848 gctctcaacatgacagccggccatgacagcgttttggcgggagatatgacagagaacagt 1907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gctctcaacatgacagccggccatgacagcgttttggcgggagatatgacagagaacagt 635
Query: 1908 tcagtgtcgtaaagtagtgtagtgattaacgcaataaccagtggactctagtgttagtgt 1967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 tcagtgtcgtaaagtagtgtagtgattaacgcaataaccagtggactctagtgttagtgt 695
Query: 1968 tctagtgttaaaatggtgcatcgtgttatttttgtataatatttattcgacggctaagca 2027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 tctagtgttaaaatggtgcatcgtgttatttttgtataatatttattcgacggctaagca 755
Query: 2028 actgatgatgttcaaacgtagcggtaagtctggtcgcacgccgtgaaccgccgcgccggc 2087
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 756 actgatgatgttcaaacgtagcggtaagtctggtcgcacgccgtgaaccgccgcgc--gc 813
Query: 2088 ggccggtgcatggttgcgatcatatattatacattcattataatcatttgcttgtctagt 2147
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 ggccggtgcatggtgacgatcatatattatacattcattataatcatttgcttgtctagt 873
Query: 2148 gtatattgtaaatgcggcatgtttcgttgtgtatgatcgactagtgcgttgggaggcgat 2207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874 gtatattgtaaatgcggcatgtttcgttgtgtatgatcgactagtgcgttgggaggcgat 933
Query: 2208 agcgtacattgtaaatatagata 2230
|||||||||||||||||||||||
Sbjct: 934 agcgtacattgtaaatatagata 956
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 206,560
Number of extensions: 3904
Number of successful extensions: 3904
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3903
Number of HSP's successfully gapped: 1
Length of query: 2230
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2213
Effective length of database: 8,119,229
Effective search space: 17967853777
Effective search space used: 17967853777
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)