BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00925 (UTR included)
(1621 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2255_C1 904 0.0
BF01019A1H08 86 2e-16
BF01056B2D01 78 5e-14
BF01027B1C05 74 8e-13
>BF14_2255_C1
Length = 1341
Score = 904 bits (456), Expect = 0.0
Identities = 456/456 (100%)
Strand = Plus / Plus
Query: 556 agttgctagaaaaactccagcaaagtggagaagttcctgcgactaaactggctgcacttc 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agttgctagaaaaactccagcaaagtggagaagttcctgcgactaaactggctgcacttc 60
Query: 616 aaaaagtgttacaaagtgattttttaaatgctgtgagagaagtgtatgaacatgtttacg 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaaagtgttacaaagtgattttttaaatgctgtgagagaagtgtatgaacatgtttacg 120
Query: 676 aaacggtggatattcagggttcggcggatatacgagcatcggctactgccaaagctaccg 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaacggtggatattcagggttcggcggatatacgagcatcggctactgccaaagctaccg 180
Query: 736 tcgctgcgtttgctgcagcagaaggtcacgctcatcccagagttgtggagttaccgaaaa 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcgctgcgtttgctgcagcagaaggtcacgctcatcccagagttgtggagttaccgaaaa 240
Query: 796 ccgaagaaggcttaggttttaacgtcatgggtggcaaggaacaaaattcgccaatttata 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccgaagaaggcttaggttttaacgtcatgggtggcaaggaacaaaattcgccaatttata 300
Query: 856 tatccagaatcatacctggcggtgtcgctgaccgtcatggaggattgaaaagaggtgacc 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tatccagaatcatacctggcggtgtcgctgaccgtcatggaggattgaaaagaggtgacc 360
Query: 916 aactgctctcagttaatggagtatccgtagagggagaaaaccatgaaaaggctgtagaac 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aactgctctcagttaatggagtatccgtagagggagaaaaccatgaaaaggctgtagaac 420
Query: 976 tgcttaagcaggcagtgggttctgtcaaactagtgg 1011
||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgcttaagcaggcagtgggttctgtcaaactagtgg 456
Score = 696 bits (351), Expect = 0.0
Identities = 394/409 (96%), Gaps = 6/409 (1%)
Strand = Plus / Plus
Query: 1010 gggagaggaactttatctaacccaggcaatgttaaagctcctctccctaaaatgcgatgg 1069
||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 939 gggagaggacctttatctaccccaggcaatgttaaaggtcctctccctaaaatgcgatgg 998
Query: 1070 acccggcacctgcatggtgaatccatggaatgctgagaagttttgtccctaataactaca 1129
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 999 acccggcacctgc--ggtgaatccatggaatgctgagaagttttgtccctaataactaca 1056
Query: 1130 taatcctaacatttcagtacctctacagcaaagtgtttacctgttctttcatcttgtctg 1189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1057 taatcctaacatttcagtacctctacagcaaagtgtttacctgttctttcatcttgtctg 1116
Query: 1190 cccatgatcacggttgctctaaaggaaccgaagcaacaggagtatttagttataaaataa 1249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1117 cccatgatcacggttgctctaaaggaaccgaagcaacaggagtatttagttataaaataa 1176
Query: 1250 taaaaaaacgcatgtatctgaaaaccttagtattattaaaatgagtacttgcgaaaacct 1309
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1177 taaaaaaacgcatgtatctnnnnaccttagtattattaaaatgagtacttgcgaaaacct 1236
Query: 1310 tagataccattaaaacaaaatttaaaaaaaaaaatattcaaattgtactttgaataaaac 1369
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1237 tagataccattaaaacaaaatttaaaaannaaaatattcaaattgtactttgaataaaac 1296
Query: 1370 ctccttactacatatttgaatcgttgttttttatacatatgaaaaaaaa 1418
|||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1297 ctccttac----tatttgaatcgttgttttttatacatatgaaaaaaaa 1341
>BF01019A1H08
Length = 504
Score = 85.7 bits (43), Expect = 2e-16
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 1030 cccaggcaatgttaaagctcctctccctaaaatgcgatggacccggcacctgcatggtga 1089
|||||||| |||| |||||||||||||| || ||||||||||||||||| ||| |||||
Sbjct: 452 cccaggcactgttgaagctcctctccctgcaacgcgatggacccggcacccgcacggtga 393
Query: 1090 atccatggaatgctgagaagttt 1112
|||||| ||||||| ||| ||||
Sbjct: 392 atccattgaatgctaagaggttt 370
>BF01056B2D01
Length = 728
Score = 77.8 bits (39), Expect = 5e-14
Identities = 72/83 (86%)
Strand = Plus / Minus
Query: 1030 cccaggcaatgttaaagctcctctccctaaaatgcgatggacccggcacctgcatggtga 1089
||||||| |||| |||||||||||||| |||| ||||||||||||||| ||| |||||
Sbjct: 164 cccaggcgctgttgaagctcctctccctgcaatgtgatggacccggcacccgcacggtga 105
Query: 1090 atccatggaatgctgagaagttt 1112
|| ||||||||| ||||| ||||
Sbjct: 104 attcatggaatgttgagaggttt 82
>BF01027B1C05
Length = 734
Score = 73.8 bits (37), Expect = 8e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 1060 aatgcgatggacccggcacctgcatggtgaatccatggaatgctgagaagttt 1112
||||| |||||||||||||| |||||| ||||||||||| |||||||||||||
Sbjct: 28 aatgcaatggacccggcacccgcatggcgaatccatggagtgctgagaagttt 80
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 305,725
Number of extensions: 22916
Number of successful extensions: 22916
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 22914
Number of HSP's successfully gapped: 5
Length of query: 1621
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1604
Effective length of database: 8,119,229
Effective search space: 13023243316
Effective search space used: 13023243316
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)