BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00945 (UTR included)
(2182 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01061B2H09 1110 0.0
>BF01061B2H09
Length = 724
Score = 1110 bits (560), Expect = 0.0
Identities = 578/583 (99%), Gaps = 2/583 (0%)
Strand = Plus / Minus
Query: 1532 gggaacgagtaatgctcttgctgatatccttgacgatgaagatgtagatgaacttggtgc 1591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 gggaacgagtaatgctcttgctgatatccttgacgatgaagatgtagatgaacttggtgc 522
Query: 1592 cgatgaagaggcattagagggtgaagcagaaggagaggagcaagaagatggtaatgatta 1651
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 521 cgatgaagaggcattagagggtgaagcagaaggagaggagcatgaagatggtaatgatta 462
Query: 1652 tagtgaagacagcagtgatgtggatgtctagcaacaatcatctctagtaattgtaatatc 1711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 tagtgaagacagcagtgatgtggatgtctagcaacaatcatctctagtaattgtaatatc 402
Query: 1712 aatttttaatattagaaatgaggtttacggcttcatagttgacacaaagttgtgtcactc 1771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 aatttttaatattagaaatgaggtttacggcttcatagttgacacaaagttgtgtcactc 342
Query: 1772 ctgtataataccttaaatgtaatattttgtgtcatcagtaagcattctagtagatagggc 1831
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ctgtataatacattaaatgtaatattttgtgtcatcagtaagcattctagtagatagggc 282
Query: 1832 tctgaaattatgtgtatttttttttttcagctcaagctcacgttttataaatttatcttc 1891
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 281 tctgaaattatgtgtattttt--ttttcagctcaagctcacgttttataaatttatcttc 224
Query: 1892 tgatatttctgaaattattagttcttatgaaaatatatttttcaaatggtgaacaacttg 1951
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 223 tgatatttctgaaattattagttcttatgaaaatatatttttcaaatgttgaacaacttg 164
Query: 1952 tgactttgaaaatatatgtatatatattttttgttcataatattcacaatatttataaaa 2011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 tgactttgaaaatatatgtatatatattttttgttcataatattcacaatatttataaaa 104
Query: 2012 tagaatatgtttcggctgatgacacagtttgaatataaataattaaagtatgttgtagct 2071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 tagaatatgtttcggctgatgacacagtttgaatataaataattaaagtatgttgtagct 44
Query: 2072 gaagtttttttttattaaatattatttgctacatatgtttatt 2114
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 gaagtttttttttattaaatattatttgctacatatgtttatt 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 347,775
Number of extensions: 9706
Number of successful extensions: 9706
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9705
Number of HSP's successfully gapped: 1
Length of query: 2182
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2165
Effective length of database: 8,119,229
Effective search space: 17578130785
Effective search space used: 17578130785
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)