BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN00993 (UTR included)
(1354 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01050B1B03 1076 0.0
>BF01050B1B03
Length = 551
Score = 1076 bits (543), Expect = 0.0
Identities = 549/551 (99%)
Strand = Plus / Plus
Query: 283 gcgtgggtgtcgatgaacacgaaaatagcgcgcgaaattcgtatccgtcgattgtttttt 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcgtgggtgtcgatgaacacgaaaatagcgcgcgaaattcgtatccgtcgattgtttttt 60
Query: 343 cttttgataaaatggcaggtgtcttttagtcagtgtattagagatacataatgggggaac 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttttgataaaatggcaggtgtcttttagtcagtgtattagagatacataatgggggaac 120
Query: 403 agacatttaatattgatgacaacaatctggaacatcacataataacgttgttcgataagt 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agacatttaatattgatgacaacaatctggaacatcacataataacgttgttcgataagt 180
Query: 463 tggagtgtttacgtcgggatgctaatcagagtgacaacatgctggccggtcgtgtgccag 522
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 181 tggagtgtttacgtcgggatgctaatcagagtgacaacatgctggccggtcgtgtgccgg 240
Query: 523 cgagacttgaagtgcggactctttcgttgtggaaggctgtcgtggctgaatgtgcggcgt 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgagacttgaagtgcggactctttcgttgtggaaggctgtcgtggctgaatgtgcggcgt 300
Query: 583 ccttcctctatgtgttcatcgtatgcggcgccgccggcggggctggtgtgggagcctccg 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccttcctctatgtgttcatcgtatgcggcgccgccggcggggctggtgtgggagcctccg 360
Query: 643 cctcggctgtgcttctcgctaacgcactcgcatccggctgcgctatagccaccttaactt 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cctcggctgtgcttctcgctaacgcactcgcatccggctgcgctatagccaccttaactt 420
Query: 703 tatgtttcgctcatatttctggagcccatataaacccttgcgtgtctgtggccctgtgcg 762
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 421 tatgtttcgctcatatttctggagcccatataaacccttgcgtgtctgtggcgctgtgcg 480
Query: 763 tgcgccggcgcgtgtctcctttacgaacagcgctgtacatagcggcgcagtgcggaggcg 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgcgccggcgcgtgtctcctttacgaacagcgctgtacatagcggcgcagtgcggaggcg 540
Query: 823 ctattgctggc 833
|||||||||||
Sbjct: 541 ctattgctggc 551
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 149,904
Number of extensions: 3092
Number of successful extensions: 3092
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3092
Number of HSP's successfully gapped: 1
Length of query: 1354
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1337
Effective length of database: 8,119,229
Effective search space: 10855409173
Effective search space used: 10855409173
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)