BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01006 (UTR included)
(3472 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2418_C1 1633 0.0
BF01009B1H12 513 e-145
>BF14_2418_C1
Length = 1220
Score = 1633 bits (824), Expect = 0.0
Identities = 885/904 (97%), Gaps = 1/904 (0%)
Strand = Plus / Plus
Query: 2570 acaggctttgataatgtttatactgtttggattggacccagaggaaatcatcataccagc 2629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acaggctttgataatgtttatactgtttggattggacccagaggaaatcatcataccagc 60
Query: 2630 tatcagattcttcaaaaagaagtggcatggagaagatacggttgtgttgccgcatataga 2689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tatcagattcttcaaaaagaagtggcatggagaagatacggttgtgttgccgcatataga 120
Query: 2690 tgatttgagtttcgaaacgaagcacgtatgtgatcaattcattacacatcacctggatag 2749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgatttgagtttcgaaacgaagcacgtatgtgatcaattcattacacatcacctggatag 180
Query: 2750 atgcaaggaagctattgctaaagacaccagatggcgcatgcgtacatatcgcaatgtgtt 2809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgcaaggaagctattgctaaagacaccagatggcgcatgcgtacatatcgcaatgtgtt 240
Query: 2810 ccgcggctcctgcctggtccgctggctgatggagtgcggtctggcctcggacgagcacga 2869
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccgcggctcgtgcctggtccgctggctgatggagtgcggtctggcctcggacgagcacga 300
Query: 2870 ggctgtccagtacgcgagacaccttctagacggacgactcatacagcacgtgcacaacaa 2929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggctgtccagtacgcgagacaccttctagacggacgactcatacagcacgtgcacaacaa 360
Query: 2930 acatcacttcactaactcacccctgctgtacatgttcagatagacctacatacataaata 2989
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acatcacttcacaaactcacccctgctgtacatgttcagatagacctacatacataaata 420
Query: 2990 catatgttatatattggcatgttatggatatatattaacgttgttttacgt-tttttttt 3048
||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| ||
Sbjct: 421 catatgttatatattggcatgttatggatgtaaattaacgttgttttacgtgtttttctt 480
Query: 3049 ctctttctacagtatttttctgtttaagttattggagattatatattcggaggttttata 3108
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 481 ctctttctacagtatttttctgtttaagttattggagattatatattcggtgattttata 540
Query: 3109 tacttatctgtttcgcttcaggcatttccaacgactgttttcactttatcaaaaaaacct 3168
||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 541 tacttgtctgtttcgcttcaggcatttccaacaactgttttcactctatcaaaaaaacct 600
Query: 3169 tgtatggattcatcaaatgttaaacgtaaattttaaaaaagtttctgtactccatagcat 3228
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 601 agtatggattcatcaaatgttaaacgtaaattttaaaaaagtttctgtacaccatagcag 660
Query: 3229 ttccagttttattacagaggtttattaaaactagtgagggtagagggtaatttgtcaagt 3288
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttccagttttattatagaggtttattaaaactagtgagggtagagggtaatttgtcaagt 720
Query: 3289 tcaaatagtctaacaagtagtatagagatgttccgatagaatgtctgaacggtgactgtt 3348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tcaaatagtctaacaagtagtatagagatgttccgatagaatgtctgaacggtgactgtt 780
Query: 3349 tttagtattggggttgctacatggtttaagagtatgctttatacagtttgtagaattaga 3408
|||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 781 cttagtattggggttgctatttggtttaagagtatgctttatacaatttgtagaattaga 840
Query: 3409 ttagactcttaaacattatattataaaaggtattatttgcttaagcttgccgtcttgatt 3468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ttagactcttaaacattatattataaaaggtattatttgcttaagcttgccgtcttgatt 900
Query: 3469 caca 3472
||||
Sbjct: 901 caca 904
>BF01009B1H12
Length = 263
Score = 513 bits (259), Expect = e-145
Identities = 262/263 (99%)
Strand = Plus / Plus
Query: 2067 cctgtagtgacgtcacctccggacgagtcgtcgagcctcgtagacaacgctgagccagcc 2126
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 cctgtagtgacgtcacctccggacgagtcgtcgagcctcgtagataacgctgagccagcc 60
Query: 2127 tctaacacgcagtctctatcaaactacgggtgttacggcactataacaacaacaccgtcg 2186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tctaacacgcagtctctatcaaactacgggtgttacggcactataacaacaacaccgtcg 120
Query: 2187 ccgaataggaacagtaatggtaattgttgctccaacgatccgaactgtgggaacggcata 2246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccgaataggaacagtaatggtaattgttgctccaacgatccgaactgtgggaacggcata 180
Query: 2247 ctgacaaacagcgctgacatcgaggacatcgttcacaatgacagggaatgtttgtgtcct 2306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctgacaaacagcgctgacatcgaggacatcgttcacaatgacagggaatgtttgtgtcct 240
Query: 2307 tcatccgaaaatcaatgtaatcc 2329
|||||||||||||||||||||||
Sbjct: 241 tcatccgaaaatcaatgtaatcc 263
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 417,899
Number of extensions: 8700
Number of successful extensions: 8700
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8699
Number of HSP's successfully gapped: 2
Length of query: 3472
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3454
Effective length of database: 8,109,745
Effective search space: 28011059230
Effective search space used: 28011059230
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)