BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01008 (UTR included)
(2320 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01028A2E12 1372 0.0
>BF01028A2E12
Length = 712
Score = 1372 bits (692), Expect = 0.0
Identities = 707/712 (99%)
Strand = Plus / Plus
Query: 893 agatgagctgcaaagaataaaattatctggagattgtattgatgttaataaagtggtaac 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agatgagctgcaaagaataaaattatctggagattgtattgatgttaataaagtggtaac 60
Query: 953 aggtgttgttgttgctatacttggttctgaagatgaagatggaatattcactgttaaaga 1012
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 61 tggtgttgttgttgctatacttggttctgaagatgaagatggaatattcgctgttaaaga 120
Query: 1013 tgtctgctgggcgggatgtaatgtacaaaaacctctacctacattaaataacgaccgata 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtctgctgggcgggatgtaatgtacaaaaacctctacctacattaaataacgaccgata 180
Query: 1073 cattgttctgatgtcaggattaagtctagcatccaaatttggagaccatttgttctcctt 1132
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 181 cattgttctgatgtcaggattaagtctagcatccaaatctggagaccatttgttctcctt 240
Query: 1133 aaacttatttatagaatggttatcagggttttgtggtactacacaatatcaagaagaagt 1192
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaacttatttatggaatggttatcagggttttgtggtactacacaatatcaagaagaagt 300
Query: 1193 ttcaaagattgtcagagttataatcgcaggtggaatctatgcaaaccagtctagtgatta 1252
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 301 ttcaaagattgtcagagttataatcgctggtggaatctatgcaaaccagtctagtgatta 360
Query: 1253 ccaacttagtgaatcggatgttataagctcatctgatgttgtcgattcattctctgctgc 1312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccaacttagtgaatcggatgttataagctcatctgatgttgtcgattcattctctgctgc 420
Query: 1313 tgtcagtgcggttacacctttagatctaatgccaggttgtaaggatcctactggcattat 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgtcagtgcggttacacctttagatctaatgccaggttgtaaggatcctactggcattat 480
Query: 1373 gttaccacagaaaccgtttcattactgtttattcccaaaagcaattgaatataaatcatt 1432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gttaccacagaaaccgtttcattactgtttattcccaaaagcaattgaatataaatcatt 540
Query: 1433 caatagagtatcaaacccttatgaatgtgatattggaggttttgtatgcttgggcacatc 1492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 caatagagtatcaaacccttatgaatgtgatattggaggttttgtatgcttgggcacatc 600
Query: 1493 aggagaaccaataagagatataatgcagaacagtgagatagacaaacatctggatgttat 1552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aggagaaccaataagagatataatgcagaacagtgagatagacaaacatctggatgttat 660
Query: 1553 gaagaagactttggagtggaggcacatggcacctacctgtcctgataatgtt 1604
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gaagaagactttggagtggaggcacatggcacctacctgtcctgataatgtt 712
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 328,147
Number of extensions: 6033
Number of successful extensions: 6033
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6033
Number of HSP's successfully gapped: 1
Length of query: 2320
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2303
Effective length of database: 8,119,229
Effective search space: 18698584387
Effective search space used: 18698584387
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)