BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01050 (UTR included)
(1765 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01052A1B06 1489 0.0
BF01041B1C10 642 0.0
>BF01052A1B06
Length = 821
Score = 1489 bits (751), Expect = 0.0
Identities = 800/815 (98%), Gaps = 1/815 (0%)
Strand = Plus / Plus
Query: 949 acgccgagatgggtatatgccttcagcacctgggcgttaaggcgatggattcgcgggatt 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acgccgagatgggtatatgccttcagcacctgggcgttaaggcgatggattcgcgggatt 60
Query: 1009 ctctccagcggggacgattctttcccttcgtccctaaggatcatttgttccccaacaagg 1068
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctcttcagcggggacgattctttcccttcgtccctaaggatcatttgttccccaacaagg 120
Query: 1069 ataaaggcttttggtactggcagtacatatactatcccactgatgagggtctagactgtt 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ataaaggcttttggtactggcagtacatatactatcccactgatgagggtctagactgtt 180
Query: 1129 gttccgaccacgcggtttccttccactacgtgaatcctgaacagatgtacgtattggact 1188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttccgaccacgcggtttccttccactacgtgaatcctgaacagatgtacgtattggact 240
Query: 1189 atctgatataccacctgagaccatacggcatcaactacaggggctccatacccaggaacg 1248
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atttgatataccacctgagaccatacggcatcaactacaggggctccatacccaggaacg 300
Query: 1249 acactgacgttagatagatatgtaccaaagaataatatatatatatttgaattgatatac 1308
|||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 301 acactgacgttagatagatacgtaccaaagaataatatatatatatttgaatttatatag 360
Query: 1309 aaagaaaaaactgacttatataatattatgtacagttcacttgtatgtgaatttgattat 1368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaagaaaaaactgacttatataatattatgtacagttcacttgtatgtgaatttgattat 420
Query: 1369 ttaacaaattaatcgatataataattccatatgtacatatattatgacactaatgaggct 1428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttaacaaattaatcgatataataattccatatgtacatatattatgacactaatgaggct 480
Query: 1429 tatactgaagcgtatctgagtctgtgtct-cttaaaatatgtgttataatacattaagta 1487
||||||| || ||||||||||||| || | |||||||||||||||||||||||||||||
Sbjct: 481 tatactgcagtgtatctgagtctgcgtatccttaaaatatgtgttataatacattaagtc 540
Query: 1488 atcataataactaataaccaaagttctatcataagccggcgagacagtccttgtagcgag 1547
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 541 atcataataactaataaccaaagttctatcataagccggcaagacagtccttgtagcgag 600
Query: 1548 gaatctgtcaatatttcttctacacaataagtcctgtagctattttaagatcaaacgtac 1607
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gaacctgtcaatatttcttctacacaataagtcctgtagctattttaagatcaaacgtac 660
Query: 1608 ttgcataatggtagcataattctctatatactaagcataatacagatctgtacggaacga 1667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttgcataatggtagcataattctctatatactaagcataatacagatctgtacggaacga 720
Query: 1668 tctgaacaatttggtcggtacacatttaatgtttatgatgtagcggggttttatttacat 1727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tctgaacaatttggtcggtacacatttaatgtttatgatgtagcggggttttatttacat 780
Query: 1728 tttatttatgtaaaaaaaatactcaatcgatatat 1762
|||||||||||||||||||||||||| |||||||
Sbjct: 781 cttatttatgtaaaaaaaatactcaattgatatat 815
>BF01041B1C10
Length = 462
Score = 642 bits (324), Expect = 0.0
Identities = 419/452 (92%), Gaps = 3/452 (0%)
Strand = Plus / Plus
Query: 1313 aaaaaactgacttatataatattatgtacagttcacttgtatgtgaatttgattatttaa 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaaaactgacttatataatattatgtacagttcacttgtatgtgaatttgattatttaa 60
Query: 1373 caaattaatcgatataataattccatatgtacatatattatgacactaatgaggcttata 1432
||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 61 caaattagtcgatataataattccatatctacatatattatgacactaatgatgcttata 120
Query: 1433 ctgaagcgtatctgagtctgtgtctcttaaaatatgtgttataatacattaagtaatcat 1492
||| || ||||| | ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 121 ctgcagtgtatcnnannctgtgtctcttaaaatatgtgttataatacatttagtaatcat 180
Query: 1493 aataactaataaccaaagttctatcataagccggcgagacagtccttgtagcgaggaatc 1552
|||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||| |
Sbjct: 181 aataactaataaccaaagttctatcataagtcggcgagacagtccttgcatcgaggaacc 240
Query: 1553 tgtcaatatttcttctacacaataagtcctgtagctattttaagatcaaacgtacttg-c 1611
||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||| |
Sbjct: 241 tgtcaatatttcttctacacaataagtactgtnnctattttaagatcaaacttacttgac 300
Query: 1612 ataatggtagcataattctctatatactaa-gcataatacagatctgtacggaacgatct 1670
| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 301 annnnggtagcataattctctatatactaatgcataatacagatctgtacggaacgatct 360
Query: 1671 gaacaatttggtcggtacacatttaatgtttatgatgtagcggggttttatttacatttt 1730
| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 361 g-anaatttggtcggtacacatttaatgtttatgatgtntcggggttttatttacattnn 419
Query: 1731 atttatgtaaaaaaaatactcaatcgatatat 1762
|||||||||||||||||||||| |||||||
Sbjct: 420 nnttatgtaaaaaaaatactcaattgatatat 451
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 203,635
Number of extensions: 7730
Number of successful extensions: 7730
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7726
Number of HSP's successfully gapped: 2
Length of query: 1765
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1748
Effective length of database: 8,119,229
Effective search space: 14192412292
Effective search space used: 14192412292
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)