BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01054 (UTR included)
(2065 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1571_C1 666 0.0
>BF14_1571_C1
Length = 707
Score = 666 bits (336), Expect = 0.0
Identities = 348/352 (98%)
Strand = Plus / Plus
Query: 19 acttaataaagaaatttgaacgagcagttacatcaaagttgaaccaagacataaaaaacg 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 acttaataaagaaatttgaacgagcagttacatcaaagttgaaccaagacataaaaaacg 415
Query: 79 agcctaagcttttggaacacaaagttaatacaacaacagtccaagagacagatacgaagc 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 agcctaagcttttggaacacaaagttaatacaacaacagtccaagagacagatacgaagc 475
Query: 139 tgccagtcaaggaaaaggttgataaggatgagaagactaatcaagatggctttacgatag 198
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 taccagtcaaggaaaaggttgataaggatgagaagactaatcaagatggctttacgatag 535
Query: 199 gctctgacacaaaggatatcaccttcaaaggtatctgggaaggccttaagttgaaaaagg 258
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 gctctgatacaaaggatatcaccttcaaaggtatctgggaaggccttaagttgaaaaagg 595
Query: 259 atttgcatttcggtaacatatcggaatccaactggaaaaccaacaaaccgatcgtctcca 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 atttgcatttcggtaacatatcggaatccaactggaaaaccaacaaaccgatcgtctcca 655
Query: 319 agacatcaatacattcaagaacggcttatgtcatatcggccatagtgatggc 370
|||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 656 agacatcaatacattcaagaacagcttatgtcatatcagccatagtgatggc 707
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 185,216
Number of extensions: 3017
Number of successful extensions: 3017
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3017
Number of HSP's successfully gapped: 1
Length of query: 2065
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2048
Effective length of database: 8,119,229
Effective search space: 16628180992
Effective search space used: 16628180992
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)