BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN01057 (UTR included)
         (1912 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF01024A2B03                                                           90   2e-17
BF14_3046_C1                                                           80   1e-14

>BF01024A2B03
          Length = 724

 Score = 89.7 bits (45), Expect = 2e-17
 Identities = 110/129 (85%), Gaps = 2/129 (1%)
 Strand = Plus / Plus

                                                                       
Query: 78  cgacaaactcctacgtgttttctccacacagtgctcgagattaaaattcgtccaacaaat 137
           |||||||||| | ||||||| ||||| ||||| |||| ||||| ||||||||| ||||||
Sbjct: 209 cgacaaactcgttcgtgtttcctccaaacagtactcgggattataattcgtcctacaaat 268

                                                                       
Query: 138 aaagacgctgacattcgcaaagtattca-cgattccagtgcgaatgaagccttagc-tta 195
           ||| ||| ||||||| ||||| |||||| ||||||||||| ||  |||||  |||| |||
Sbjct: 269 aaaaacgttgacattggcaaaatattcaacgattccagtgagagcgaagcgatagcatta 328

                    
Query: 196 aaaaaaaaa 204
           |||||||||
Sbjct: 329 aaaaaaaaa 337


>BF14_3046_C1
          Length = 1016

 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 71/80 (88%), Gaps = 1/80 (1%)
 Strand = Plus / Plus

                                                                        
Query: 102  cacacagtgctcgagattaaaattcgtccaacaaataaagacgctgacattcgcaaagta 161
            |||||||| |||||| ||| ||||| ||||||||||||| ||| ||||||| ||||| ||
Sbjct: 924  cacacagtactcgagtttataattcctccaacaaataaaaacgttgacattggcaaaata 983

                                
Query: 162  tt-cacgattccagtgcgaa 180
            || |||||||||||||||||
Sbjct: 984  ttccacgattccagtgcgaa 1003


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 226,453
Number of extensions: 5018
Number of successful extensions: 5018
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5016
Number of HSP's successfully gapped: 2
Length of query: 1912
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1895
Effective length of database: 8,119,229
Effective search space: 15385938955
Effective search space used: 15385938955
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)