BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01062 (UTR included)
(1822 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01030B2G02 1076 0.0
BF01060A1E08 628 e-180
>BF01030B2G02
Length = 547
Score = 1076 bits (543), Expect = 0.0
Identities = 546/547 (99%)
Strand = Plus / Plus
Query: 428 cgaacacggtgatctagcgcacgcgcatctaaaacatacaaccccataagaaaaacaatt 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgaacacggtgatctagcgcacgcgcatctaaaacatacaaccccataagaaaaacaatt 60
Query: 488 aataaaaaacaaaatgaacaatgccgaattatatcataaaagtaacacgctgcaaaagag 547
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aattaaaaacaaaatgaacaatgccgaattatatcataaaagtaacacgctgcaaaagag 120
Query: 548 ggatgcccgacaatgtttagaagagtatgcaaaaaaaattaaatggaaaagcgagggtga 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggatgcccgacaatgtttagaagagtatgcaaaaaaaattaaatggaaaagcgagggtga 180
Query: 608 tgccgttatagacatcggatgcggagatggcagcgtcactaccaatatactgaaaacttt 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgccgttatagacatcggatgcggagatggcagcgtcactaccaatatactgaaaacttt 240
Query: 668 cttacctaataactgcaaggagcttataggatgcgacattagcgagaaaatgatacagtt 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cttacctaataactgcaaggagcttataggatgcgacattagcgagaaaatgatacagtt 300
Query: 728 tgctaacgaacatcacgccatggataacatcagcttcacgcggctcgacatagaaggtga 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgctaacgaacatcacgccatggataacatcagcttcacgcggctcgacatagaaggtga 360
Query: 788 actgcctgatgaacttcgtgagagattccaccacgcattttccttttacactctacattg 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 actgcctgatgaacttcgtgagagattccaccacgcattttccttttacactctacattg 420
Query: 848 ggttagacaacaggaaacagcattttcaaatatctacgaccttctggtgagtggtggcga 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggttagacaacaggaaacagcattttcaaatatctacgaccttctggtgagtggtggcga 480
Query: 908 ctgtcttctggtatttcttggtcatatgccggtattcgatgtatacagactccttgctag 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctgtcttctggtatttcttggtcatatgccggtattcgatgtatacagactccttgctag 540
Query: 968 atcaact 974
|||||||
Sbjct: 541 atcaact 547
>BF01060A1E08
Length = 609
Score = 628 bits (317), Expect = e-180
Identities = 329/333 (98%)
Strand = Plus / Minus
Query: 1490 ttttttataaagaaggttaaattttatttgtatgtgtattaactgcaaaataaggtacct 1549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 ttttttataaagaaggttaaattttatttgtatgtgtattaactgcaaaataaggtacct 539
Query: 1550 gatagtacaacaatttaatataattcacttagtgtaatacttatttatgctgttattttt 1609
||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 538 gatagtacaacaatttaatgtaattcacttagtgtaatacttatttaggctgttattttt 479
Query: 1610 atataataataaagctatgacatatttttcttataaattatataataaaaaaaaattggt 1669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 atataataataaagctatgacatatttttcttataaattatataataaaaaaaaattggt 419
Query: 1670 atatataatataagaataaagttacgctgttaaacaatatcgcctccatcttaaataaat 1729
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 418 atatataatataagaataaagttccgctgttaaacaatatcgcctccatcttaaataaat 359
Query: 1730 atacttagatgtggtgtcacgatgtaggtattccgtataaactctgagactgactgactg 1789
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 358 atacttagatgtggtgtcacgatgtaggtattccgtataaactttgagactgactgactg 299
Query: 1790 atttttatcatattccgtaactctttaattagg 1822
|||||||||||||||||||||||||||||||||
Sbjct: 298 atttttatcatattccgtaactctttaattagg 266
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 299,062
Number of extensions: 7906
Number of successful extensions: 7906
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7906
Number of HSP's successfully gapped: 2
Length of query: 1822
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1805
Effective length of database: 8,119,229
Effective search space: 14655208345
Effective search space used: 14655208345
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)