BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01074 (UTR included)
(1765 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2370_C1 1568 0.0
BF01029B1B06 70 1e-11
BF01040A1G09 68 5e-11
BF01033A1F05 68 5e-11
BF01012A2F10 68 5e-11
>BF14_2370_C1
Length = 1004
Score = 1568 bits (791), Expect = 0.0
Identities = 809/815 (99%)
Strand = Plus / Minus
Query: 387 acatatctattttgttatttgaagttcaaacttaatctagcacgtacaaagagacacaga 446
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1003 acatatctgttttgttatttgaagttcaaacttaatctagcacgtacaaagagacacaga 944
Query: 447 gcattagttacatccatagaaataattatgctgtgatatttttaaatattaacaatggtg 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943 gcattagttacatccatagaaataattatgctgtgatatttttaaatattaacaatggtg 884
Query: 507 gtaaacgcaccagattctcctatacaggctgaagtgatatttgtaatagaagcaacgtca 566
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 883 gtaaacgcaccagattctcctatacaggctgaagtgatatttgtaatagaagcgacgtca 824
Query: 567 gtgaacagcgctttcataaatgaactgaaaacaaactacattatacccacactcgaatat 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 gtgaacagcgctttcataaatgaactgaaaacaaactacattatacccacactcgaatat 764
Query: 627 tttcatggtggtgctttagaggagggtgtgggcagtggttcagtgtatggggtagtggcc 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 tttcatggtggtgctttagaggagggtgtgggcagtggttcagtgtatggggtagtggcc 704
Query: 687 taccaagctgcggactgtcaccctggttcccctgtctcaacatttggtccatttacttca 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 taccaagctgcggactgtcaccctggttcccctgtctcaacatttggtccatttacttca 644
Query: 747 ccggagacagttatagacacagttgataatatacagttcataggtggtcatgcagaaagc 806
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 643 ccggagacagttatagacacagttgataatatacagttcataggtggtcatgcggaaagc 584
Query: 807 cgagcttgtgtcactgaagccctaaccgtggcgctatcatgcctcgaggagttgggtcgc 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 cgagcttgtgtcactgaagccctaaccgtggcgctatcatgcctcgaggagttgggtcgc 524
Query: 867 actgatatacctatgcatgtggtgctactgtgctgttcaccgccctactccgcctacaac 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 actgatatacctatgcatgtggtgctactgtgctgttcaccgccctactccgcctacaac 464
Query: 927 ggtggcctggtgccagctggcgctccagcgacggtggagcaagctggcagactcatagcc 986
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ggtggcctggtgccagctggtgctccagcgacggtggagcaagctggcagactcatagcc 404
Query: 987 gagcgcggcgtccagctgtccatagcagctgctaaacgcttgccagcgctgctagcgctt 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gagcgcggcgtccagctgtccatagcagctgctaaacgcttgccagcgctgctagcgctt 344
Query: 1047 tacgagcacgctggtggtgaactgcatacagcgcaacagaggaactatgctaaggatcct 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tacgagcacgctggtggtgaactgcatacagcgcaacagaggaactatgctaaggatcct 284
Query: 1107 cgtcacctggtgctacttcgagggtacagtcttaaagagcgcccgcccagccccgccccg 1166
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 283 cgccacctggtgctacttcgagggtacagccttaaagagcgcccgcccagccccgccccg 224
Query: 1167 ccgccagcaccggacatacagacggatgtttacgg 1201
|||||||||||||||||||||||||||||||||||
Sbjct: 223 ccgccagcaccggacatacagacggatgtttacgg 189
Score = 244 bits (123), Expect = 4e-64
Identities = 138/145 (95%)
Strand = Plus / Minus
Query: 1312 ccggcggcccgcgcatcggggccccagtaccgtcccggaggcccggcccgcggctggctc 1371
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 163 ccggcggcccgcgcgtcggggccccagtaccgtcccggnnncccggcccgcggctggctc 104
Query: 1372 gcccctccgccgagacagcagtacgctaactcggctcttctcacacaactggcacaaccc 1431
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 gcccctccgccgnnncagcagtacgctaactcggctcttctcacacaactggcacaaccc 44
Query: 1432 tcatgtccgccgcccccgatacagg 1456
|||||||||||||||||||||||||
Sbjct: 43 tcatgtccgccgcccccgatacagg 19
>BF01029B1B06
Length = 765
Score = 69.9 bits (35), Expect = 1e-11
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 1557 tatatatatatatatatatatatatatatatacag 1591
|||||||||||||||||||||||||||||||||||
Sbjct: 749 tatatatatatatatatatatatatatatatacag 715
>BF01040A1G09
Length = 753
Score = 67.9 bits (34), Expect = 5e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 1557 tatatatatatatatatatatatatatatataca 1590
||||||||||||||||||||||||||||||||||
Sbjct: 629 tatatatatatatatatatatatatatatataca 596
>BF01033A1F05
Length = 770
Score = 67.9 bits (34), Expect = 5e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 1557 tatatatatatatatatatatatatatatataca 1590
||||||||||||||||||||||||||||||||||
Sbjct: 538 tatatatatatatatatatatatatatatataca 505
>BF01012A2F10
Length = 722
Score = 67.9 bits (34), Expect = 5e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 1557 tatatatatatatatatatatatatatatataca 1590
||||||||||||||||||||||||||||||||||
Sbjct: 434 tatatatatatatatatatatatatatatataca 467
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 289,013
Number of extensions: 17623
Number of successful extensions: 17623
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 17595
Number of HSP's successfully gapped: 7
Length of query: 1765
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1748
Effective length of database: 8,119,229
Effective search space: 14192412292
Effective search space used: 14192412292
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)