BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01075 (UTR included)
(1999 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3512_C1 858 0.0
BF14_2370_C1 115 3e-25
BF01029B1B06 70 1e-11
BF01040A1G09 68 6e-11
BF01033A1F05 68 6e-11
BF01012A2F10 68 6e-11
>BF14_3512_C1
Length = 676
Score = 858 bits (433), Expect = 0.0
Identities = 483/504 (95%), Gaps = 18/504 (3%)
Strand = Plus / Minus
Query: 1032 ggtatgataatgggaggtggaatggccggtcaggtgggtcaggtggggcaagtcaaccag 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ggtatgataatgggaggtggaatggccggtcaggtgggtcaggtggggcaagtcaaccag 484
Query: 1092 gtcggacaagtcagtcaagtcgggcaagtcggtggcaagggaccgcgcggtgttcccctg 1151
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 483 gtcggacaagtcagtcaagtcgggcaagtcggtggtaagggaccgcgcggtgttcccctg 424
Query: 1152 gacgggctggaggcggccaggcaacagaacctggagaagatccagcacttgcagcagact 1211
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 423 gacgggctggaggcggccaggcaacagaacctggagaagatccagcacttgcagcagatt 364
Query: 1212 ctggaggccgctcaccaacaggaagcacagttcaaatcgcagatggacatcatgtcgcat 1271
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ttggaggccgctcaccaacaggaagcacagttcaaatcgcagatggacatcatgtcgcat 304
Query: 1272 ttacacgcggcacaacaacaggaacaa------------------gagcagcaacgcaag 1313
||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 303 ttacacgcggcacaacaacaggaacaacattacaagcatttggaggagcagcaacgcaag 244
Query: 1314 catcaactgcagcatcagttgcagcaacaactccgcggagcgcagcgaggcatgagaccc 1373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 catcaactgcagcatcagttgcagcaacaactccgcggagcgcagcgaggcatgagaccc 184
Query: 1374 atcatgcccacaaaccctgggcttaggcatttattacaacagcaaccgcagtatcgcgct 1433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 atcatgcccacaaaccctgggcttaggcatttattacaacagcaaccgcagtatcgcgct 124
Query: 1434 gcgggcacgggccgcccgcccggacagcagttcgaggacgtggcgaactacaacgacttc 1493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gcgggcacgggccgcccgcccggacagcagttcgaggacgtggcgaactacaacgacttc 64
Query: 1494 ctataaaaatataatattttgact 1517
||||||||||||||||||||||||
Sbjct: 63 ctataaaaatataatattttgact 40
Score = 77.8 bits (39), Expect = 6e-14
Identities = 39/39 (100%)
Strand = Plus / Minus
Query: 959 catgaccggtaacatgcccgccgccaccatggctggtaa 997
|||||||||||||||||||||||||||||||||||||||
Sbjct: 676 catgaccggtaacatgcccgccgccaccatggctggtaa 638
>BF14_2370_C1
Length = 1004
Score = 115 bits (58), Expect = 3e-25
Identities = 58/58 (100%)
Strand = Plus / Minus
Query: 1 aactcggctcttctcacacaactggcacaaccctcatgtccgccgcccccgatacagg 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 aactcggctcttctcacacaactggcacaaccctcatgtccgccgcccccgatacagg 19
>BF01029B1B06
Length = 765
Score = 69.9 bits (35), Expect = 1e-11
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 159 tatatatatatatatatatatatatatatatacag 193
|||||||||||||||||||||||||||||||||||
Sbjct: 749 tatatatatatatatatatatatatatatatacag 715
>BF01040A1G09
Length = 753
Score = 67.9 bits (34), Expect = 6e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 159 tatatatatatatatatatatatatatatataca 192
||||||||||||||||||||||||||||||||||
Sbjct: 629 tatatatatatatatatatatatatatatataca 596
>BF01033A1F05
Length = 770
Score = 67.9 bits (34), Expect = 6e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 159 tatatatatatatatatatatatatatatataca 192
||||||||||||||||||||||||||||||||||
Sbjct: 538 tatatatatatatatatatatatatatatataca 505
>BF01012A2F10
Length = 722
Score = 67.9 bits (34), Expect = 6e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 159 tatatatatatatatatatatatatatatataca 192
||||||||||||||||||||||||||||||||||
Sbjct: 434 tatatatatatatatatatatatatatatataca 467
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 321,189
Number of extensions: 19746
Number of successful extensions: 19746
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 19718
Number of HSP's successfully gapped: 9
Length of query: 1999
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1982
Effective length of database: 8,119,229
Effective search space: 16092311878
Effective search space used: 16092311878
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)