BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01081 (UTR included)
(2239 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01061A1A09 1041 0.0
>BF01061A1A09
Length = 586
Score = 1041 bits (525), Expect = 0.0
Identities = 562/575 (97%)
Strand = Plus / Minus
Query: 292 ctcccctcattccccttcctaacctctttccccccttctctatcttttcctttcctggtt 351
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ctcccctcattcccctccctaacctctttccccccttctctatcttttcctttcctggtt 527
Query: 352 ttacccgtaaaacggggttttggaggtcagacggcagtcgctccgttaaaaccactcccg 411
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 526 ttacccataaaacggggttttggaggtcagacggcagtcgctccgttaaaaccattcccg 467
Query: 412 ccactcttatggttgcaaaagtttatggactgggtacggctagggcgtcgccgataaacg 471
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 466 ccactcttatggttgcaaaagtctatggactgggtacggctagggcgtcgccgataaacg 407
Query: 472 acgcgcaggcacatcgccctacacctgcgatgagtgggcaagggctaccgtgtcaagtac 531
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 406 acgcgcaggcacatcgccctacacctgcgataagtgggcaagggctaccgtgtcaagtac 347
Query: 532 gggcacggctaaagacgttagtaccccaaaggaaactccgctttgcaacgtggaatattg 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gggcacggctaaagacgttagtaccccaaaggaaactccgctttgcaacgtggaatattg 287
Query: 592 gctctctaaccggacgatgcagagaactcgcagatgtactcatgagacgtcgggtccagt 651
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 286 gctctctaaccggacgatgcagagaactcgcagatgtactcatgagacgtcaggtccagt 227
Query: 652 gtgcgttcctccaggaaactcgctggaagggtaataagtctcggaacatcggacagggtt 711
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 226 gtgcgttcctccaggaaactcgctggaagggcaataagtctcggaacatcggacagggtt 167
Query: 712 accggctgatatacactgggtcgccttcaggtaaagctggtgtagcggtagtgctatctg 771
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 166 accggctgatatacactgggtcgccatcaggtaaagctggtgtagcggtagtgctatctg 107
Query: 772 aagagcttcggaatggtcttcttgaagttgatcgtcgctgcgaccgcctgatgcgggttc 831
|||||||||||||||||||||||||||| || ||||||||||||||| ||||||||| |
Sbjct: 106 aagagcttcggaatggtcttcttgaagtcgaccgtcgctgcgaccgcnngatgcgggtgc 47
Query: 832 gggtactgatcgagggagtgattactaacttgatc 866
|||||||||||||||||||||||||||||||||||
Sbjct: 46 gggtactgatcgagggagtgattactaacttgatc 12
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 159,651
Number of extensions: 2234
Number of successful extensions: 2234
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2234
Number of HSP's successfully gapped: 1
Length of query: 2239
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2222
Effective length of database: 8,119,229
Effective search space: 18040926838
Effective search space used: 18040926838
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)