BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01089 (UTR included)
(1762 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2450_C1 1618 0.0
>BF14_2450_C1
Length = 879
Score = 1618 bits (816), Expect = 0.0
Identities = 840/848 (99%)
Strand = Plus / Plus
Query: 467 ttactgagttttgtttttattacgaaatcacaaaatgcgaatatatagttatttatgtaa 526
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2 ttactgagttttgtttttattacgaaatcacaaaatgcgaatatacagttatttatgtaa 61
Query: 527 aaaagttggagatttaactgttaaatactctaatctgccggagtcatacataaagagaag 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aaaagttggagatttaactgttaaatactctaatctgccggagtcatacataaagagaag 121
Query: 587 ctatgaacaggtttattggaggaatccaaagggatacccacagtacccagctgctcaaat 646
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 122 ctatgaacaggtttattggaggaatccaaaaggatacccacagtacccagctgctcaaat 181
Query: 647 agcgcggaaaaaatttcgttttactacgaacaggccgtggaccttgcaatttgctaggca 706
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 182 agcgcggaaaaaatttcgttttactacgaacaggccgtggaccttgcaatttgcaaggca 241
Query: 707 aaatgaacgaggtactctcagaaaaaaggtgttcctagaacccgttggagagtggaagtt 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aaatgaacgaggtactctcagaaaaaaggtgttcctagaacccgttggagagtggaagtt 301
Query: 767 tttcaagggtgaccgagtagaagtaatggttggtaaagataaaggaaaacaaggtctcat 826
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 302 tttcaagggtgaccgagtagaagtaatggtcggtaaagataaaggaaaacaaggtctcat 361
Query: 827 atgccaagtgattcaagagaggaattgggtcatagttgaaggtttgaacacacattatag 886
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 362 atgccaagtgattcaagagaggaattgggtcatagttgaaggtttaaacacacattatag 421
Query: 887 agtggttggtaaagagaaagattttcccggtataacgatacaatctgaggctccgttgct 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 agtggttggtaaagagaaagattttcccggtataacgatacaatctgaggctccgttgct 481
Query: 947 agttacaacgggtgttaagctcgttgatcctgaaacattgaaagcaacggaagtcgagtg 1006
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 agttacaacgggcgttaagctcgttgatcctgaaacattgaaagcaacggaagtcgagtg 541
Query: 1007 gagatttacagaagaaggtgaaaaggtgcgtgtgtcaacggtcactggtcgtatcatacc 1066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gagatttacagaagaaggtgaaaaggtgcgtgtgtcaacggtcactggtcgtatcatacc 601
Query: 1067 aataccaaaagccgctgaagaaactgttgattacaagagtaaagaactctacgtagagaa 1126
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 602 aataccaaaagccgctgaagaaactgttgattacaaaagtaaagaactctacgtagagaa 661
Query: 1127 tgaagccaaggacacagcggccagtgatgttactaagataacttttcaaccgaaattatg 1186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tgaagccaaggacacagcggccagtgatgttactaagataacttttcaaccgaaattatg 721
Query: 1187 tacatttgaaatggatataatggaaagtatgggaattaaagaggacagagtgccggccaa 1246
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 722 tacatttgaaatggatataatggaaagtatgggaattaaagaagacagagtgccggccaa 781
Query: 1247 gtcttactggtattgaacaaaatattagaatattgttagttatattttaaataaattaat 1306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 gtcttactggtattgaacaaaatattagaatattgttagttatattttaaataaattaat 841
Query: 1307 aatagtaa 1314
||||||||
Sbjct: 842 aatagtaa 849
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 262,046
Number of extensions: 6081
Number of successful extensions: 6081
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6080
Number of HSP's successfully gapped: 1
Length of query: 1762
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1745
Effective length of database: 8,119,229
Effective search space: 14168054605
Effective search space used: 14168054605
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)