BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01090 (UTR included)
(2356 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_800_C1 1683 0.0
>BF14_800_C1
Length = 1454
Score = 1683 bits (849), Expect = 0.0
Identities = 885/897 (98%)
Strand = Plus / Plus
Query: 985 gcgacctgcccacttatttgacacgttttcaatgggatatggccaagtaccccataaagc 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 gcgacctgcccacttatttgacacgttttcaatgggatatggccaagtaccccataaagc 474
Query: 1045 aaagtctgcgcaacatcgccgatataatcagtaaacaggtaggacaaatcgacgctgatt 1104
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 475 aaagtctgcgcaacatcgccgacattatcagtaaacaggtaggacaaatcgacgctgatt 534
Query: 1105 tgaagatgaagtcagccgcgtacaactcgctgaagggcaacttgcagagcttggagaaga 1164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 tgaagatgaagtcagccgcgtacaactcgctgaagggcaacttgcagagcttggagaaga 594
Query: 1165 aacagaccggcagcctgttgacccgtaacctggctgacctcgtcaagagggaacacttca 1224
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 595 aacagaccggcagcctattgacccgtaacctggctgatctcgtcaagagggaacacttca 654
Query: 1225 tcctagacagcgaatatctgaccactctcctcgtcattgtccccaaggcgatgtttaacg 1284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 tcctagacagcgaatatctgaccactctcctcgtcattgtccccaaggcgatgtttaacg 714
Query: 1285 actggaacgctaactacgagaagataaccgacatgatagtgccgcgctccacccagctcg 1344
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 actggaacgctaactatgagaagataaccgacatgatagtgccgcgctccacccagctcg 774
Query: 1345 tgcatcaagacaacgactacggcctcttcaccgtgactctgttccgtaaggtcgtcgacg 1404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 tgcatcaagacaacgactacggcctcttcaccgtgactctgttccgtaaggtcgtcgacg 834
Query: 1405 agttcaagctgcacgctcgcgagcgcaagttcatcgtgcgcgagttctcatacaacgagg 1464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 agttcaagctgcacgctcgcgagcgcaagttcatcgtgcgcgagttctcatacaacgagg 894
Query: 1465 cggacctcgccgccggcaagaacgagatcaccaggctcgtcaccgacaagaagaagcagt 1524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 cggacctcgccgccggcaagaacgagatcaccaggctcgtcaccgacaagaagaagcagt 954
Query: 1525 tcggcccactggtgagatggttgaaagtgaacttctctgaatgtttctgtgcctggatcc 1584
||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 955 tcggcccgctggtgagatggttgaaagtgaacttctctgagtgtttctgtgcctggatcc 1014
Query: 1585 acgtgaaggctctccgggtgttcgtggagtccgttctgagatacggcctgccggtgaact 1644
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1015 acgtgaaggctctccgggtgttcgtggagtcggttctgagatacggcctgccggtgaact 1074
Query: 1645 tcctagcggtggtgatggtcccagctcgcaagagtatgaagaagctgcgcgacgtcctgc 1704
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1075 tcctagcggtggtgatggtcccagcccgcaagagtatgaagaagctgcgcgacgtcctgc 1134
Query: 1705 agcacctgtacgcgcacctcgaccactccgcacaacagcacggacacgctgcacaggata 1764
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1135 agcacctgtacgctcacctcgaccactccgcacaacagcacggacacgctgcacaggata 1194
Query: 1765 acgctgagttggctggtctaggcttcggtcaatcggattacttcccgtatgttttctaca 1824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1195 acgctgagttggctggtctaggcttcggtcaatcggattacttcccgtatgttttctaca 1254
Query: 1825 aaatcaacattgacatggtcgagaaagcttagacgggagccgtactgtgtataggta 1881
||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 1255 aaatcaacattgacatggtcgagaaagcttagacgggtgccatactgtgtataggta 1311
Score = 575 bits (290), Expect = e-163
Identities = 290/290 (100%)
Strand = Plus / Plus
Query: 496 tcaagatgagtgaatactggttaattagtgcccctggcgacaaaacctgccaacaaacat 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 tcaagatgagtgaatactggttaattagtgcccctggcgacaaaacctgccaacaaacat 186
Query: 556 gggatactttgaataatgccaccaaatctggcagcctcagtgtgaactacaaattcccta 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 gggatactttgaataatgccaccaaatctggcagcctcagtgtgaactacaaattcccta 246
Query: 616 tacccgacctcaaggtgggtacattggatcaactcgttggtttgtcggatgatctcggca 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tacccgacctcaaggtgggtacattggatcaactcgttggtttgtcggatgatctcggca 306
Query: 676 aacttgatacttttgttgagggtgttacaaggaaggtggcgcaatatctcggagaggtac 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 aacttgatacttttgttgagggtgttacaaggaaggtggcgcaatatctcggagaggtac 366
Query: 736 ttgaagatcaacgcgacaaacttcacgagaatctgacggcaaacaatagc 785
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ttgaagatcaacgcgacaaacttcacgagaatctgacggcaaacaatagc 416
Score = 194 bits (98), Expect = 4e-49
Identities = 101/102 (99%)
Strand = Plus / Plus
Query: 2255 aggtatggtcaccagatggaaatgccgttctaagtgctagctgaaaccatagttgaaaga 2314
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1307 aggtatggtcaccagatggaaatgctgttctaagtgctagctgaaaccatagttgaaaga 1366
Query: 2315 ttgtataattttatttctgattgttctttccatacacatcga 2356
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1367 ttgtataattttatttctgattgttctttccatacacatcga 1408
Score = 143 bits (72), Expect = 1e-33
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 1 gtcttgtgatttcaccaaaaattagctgtttcgaatatttattgttaaacagcacttaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 gtcttgtgatttcaccaaaaattagctgtttcgaatatttattgttaaacagcacttaat 111
Query: 61 ttataacaccgg 72
||||||||||||
Sbjct: 112 ttataacaccgg 123
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 236,294
Number of extensions: 4711
Number of successful extensions: 4711
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4711
Number of HSP's successfully gapped: 4
Length of query: 2356
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2339
Effective length of database: 8,119,229
Effective search space: 18990876631
Effective search space used: 18990876631
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)