BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01108 (UTR included)
(1993 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 474 e-133
BF01049A2D11 170 5e-42
BF14_335_C4 119 2e-26
BF01019A1H08 113 1e-24
BF14_729_C1 94 1e-18
BF14_335_C2 86 2e-16
BF01056B2D01 80 2e-14
BF01044B1A07 70 1e-11
>BF14_729_C3
Length = 2041
Score = 474 bits (239), Expect = e-133
Identities = 376/423 (88%)
Strand = Plus / Plus
Query: 1570 attcttttgcaacaagcgggtgtatacgaacttgattatgactttggcttgtcatacatt 1629
|||| ||| |||||||||||||||||| |||| || | ||||| ||||||||||||||||
Sbjct: 1116 attcctttacaacaagcgggtgtatacaaactcgactgtgactgtggcttgtcatacatt 1175
Query: 1630 agatagacaaagaggaacatcgatacaagggttaaagaacacttctcagacatcaaaaat 1689
|| |||| ||||||| ||||| |||||| ||||| |||||| ||||||||||||||||
Sbjct: 1176 ggacagacgaagaggagcatcggtacaagagttaaggaacacatctcagacatcaaaaac 1235
Query: 1690 aggcgcgcgtcgaagtcagcagtgtgtgatcacacaatggacaaaccaggctactacatt 1749
||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 1236 aggcgcgcgtcgaagtcagcagtgtgtgaacacacaatggacaaaccaggccactacatt 1295
Query: 1750 ctgtttaataaactactaatcctcgctcgggaagacaagtatatacagaagttaatccgc 1809
| ||| |||||| | ||||||||||||||||||||||||||||| || ||||| |||
Sbjct: 1296 cgttttgataaacctcaaatcctcgctcgggaagacaagtatataccgagattaattcgc 1355
Query: 1810 gagactattgaaataaaaaaacatcccaatttcaatagagaagatggttggaatctatca 1869
||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1356 gaggctattgaaattaaaaaacatcccaatttcaatagagaagatggctggaatctatca 1415
Query: 1870 aacacctgggacccccttctttaaaatataaaatcccatgtccgtgaccacaccgcaaga 1929
||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||| ||
Sbjct: 1416 aacacctgggaccccgttcttaaaaatataaaatcccatgtccgaaaccacaccgcagga 1475
Query: 1930 cctggggacaccgtaagcgcattctgccagcacccaaagcggtacgccagaaaattaaga 1989
||| |||||||| ||||||||||||| ||| ||| |||||||||||| |||||||
Sbjct: 1476 cctcaagacaccgtgagcgcattctgccggcatccagagcggtacgccannnnattaaga 1535
Query: 1990 aat 1992
|||
Sbjct: 1536 aat 1538
Score = 303 bits (153), Expect = 6e-82
Identities = 210/229 (91%)
Strand = Plus / Plus
Query: 1339 agagcgcccaacacttttgtgatgctgaccatttagaggccaagctgcagcatctaaaac 1398
|||| ||||||||| |||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 847 agagagcccaacacctttgtgatgctgaccacctagaggccgagctgcagcatgtaaaac 906
Query: 1399 atgctctcacaatcaacaacctgcctgtgcctcgccagcatcgcaagaactacttgaagt 1458
|||||||||| |||||||||||||| |||||||||||||||||||||||| || |||||
Sbjct: 907 atgctctcactatcaacaacctgcccgtgcctcgccagcatcgcaagaaccacctgaagc 966
Query: 1459 cacccacagttgagcgacaacctgcgatactataatatgtaaagggagttactgacagaa 1518
||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 967 cacccacagttgaacgacaacctgcgatactaccatatgtgaagggagttactgacagaa 1026
Query: 1519 taggcaacatcttgaagaaggtttcgatcaagactatatacaaaccaca 1567
||||||||||||||||||||||||| || || ||||| |||||||||||
Sbjct: 1027 taggcaacatcttgaagaaggtttccattaaaactatttacaaaccaca 1075
Score = 272 bits (137), Expect = 2e-72
Identities = 249/284 (87%), Gaps = 3/284 (1%)
Strand = Plus / Plus
Query: 1037 cccctttgtcgctgatatattcatggaggacttcgaggtgcgaggcctttgctctcctcc 1096
|||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 494 ccccgttgtcgctgaaatattcatggaggacttcgaggtgcgagccctttgctctcctcc 553
Query: 1097 aataagacctttaatatataaacggtatgcagatggaacctacacaattttaaacaaaaa 1156
|||||||||||||| | ||||||||||| ||||| |||| ||||| ||||| |||||
Sbjct: 554 tataagacctttaatttttaaacggtatgtagatgacacctttacaatattaaataaaaa 613
Query: 1157 tgaaccatctgcttttctgaaccaccttaatattgaagaattaagcaagattcagtttac 1216
| || ||||||||||||||||||| || ||| | | ||| | ||||||||||||||
Sbjct: 614 taaaacatctgcttttctgaaccatctcaat-tctatcaat--aataagattcagtttac 670
Query: 1217 tatacaattagaggcaaaaaaatctttagctttccttgatatacttttcattaggaatcc 1276
|||| |||| |||||||| || |||||||||||||||||||||||| | ||||||||||
Sbjct: 671 tatagaattggaggcaaataattctttagctttccttgatatacttgttgttaggaatcc 730
Query: 1277 tgaaaatactttggggcatactgtttataggaaacccacacata 1320
||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 731 tgacaatactttgggacatactgtttataggaaacccacacata 774
>BF01049A2D11
Length = 776
Score = 170 bits (86), Expect = 5e-42
Identities = 144/162 (88%), Gaps = 1/162 (0%)
Strand = Plus / Plus
Query: 1618 ttgtcatacattagatagacaaagaggaacatcgatacaagggttaaagaacacttctca 1677
|||||||||||| || |||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 614 ttgtcatacattggacagacaaagaggagcatcgatacaagggttaaagaacacatctca 673
Query: 1678 gacatcaa-aaataggcgcgcgtcgaagtcagcagtgtgtgatcacacaatggacaaacc 1736
|| |||| ||||||| | | |||||||||||||| ||||| |||||||||||||||||
Sbjct: 674 gaaatcatgaaataggtgtacatcgaagtcagcagtatgtgaacacacaatggacaaacc 733
Query: 1737 aggctactacattctgtttaataaactactaatcctcgctcg 1778
|||| ||||||||| |||| |||||| || ||||||||||||
Sbjct: 734 aggccactacattcggtttgataaaccacaaatcctcgctcg 775
>BF14_335_C4
Length = 1491
Score = 119 bits (60), Expect = 2e-26
Identities = 103/116 (88%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 96 atgacacgaaaactctcagcattccatggattcatcgtgcgggtaccgggtccatcgcgt 155
|||| ||||||||||||||||||||||||||||| ||||||| | | ||| |||||||||
Sbjct: 1366 atgagacgaaaactctcagcattccatggattcaccgtgcggttgcggggaccatcgcgt 1307
Query: 156 tgcaaagagaggagcttcaatagtgcctgtgtcatgcgacctaggtgtaggtttaa 211
||| | |||||||||||||| |||||||| | | ||||||| ||||||||||||||
Sbjct: 1306 tgc-aggagaggagcttcaacagtgcctgggacttgcgacccaggtgtaggtttaa 1252
>BF01019A1H08
Length = 504
Score = 113 bits (57), Expect = 1e-24
Identities = 96/109 (88%)
Strand = Plus / Plus
Query: 103 gaaaactctcagcattccatggattcatcgtgcgggtaccgggtccatcgcgttgcaaag 162
|||| |||| ||||||| ||||||||| ||||||||| ||||||||||||||||||| |
Sbjct: 369 gaaacctcttagcattcaatggattcaccgtgcgggtgccgggtccatcgcgttgcaggg 428
Query: 163 agaggagcttcaatagtgcctgtgtcatgcgacctaggtgtaggtttaa 211
||||||||||||| |||||||| | ||||||| ||||||||||||||
Sbjct: 429 agaggagcttcaacagtgcctgggagttgcgacccaggtgtaggtttaa 477
>BF14_729_C1
Length = 981
Score = 93.7 bits (47), Expect = 1e-18
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 1501 agggagttactgacagaataggcaacatcttgaagaaggtttcgatcaagactatataca 1560
|||||||||||||||||||||||||||| ||||||||| |||| ||||||||||| |||
Sbjct: 142 agggagttactgacagaataggcaacattttgaagaagctttccatcaagactattcaca 83
Query: 1561 aaccaca 1567
|||||||
Sbjct: 82 aaccaca 76
>BF14_335_C2
Length = 1827
Score = 85.7 bits (43), Expect = 2e-16
Identities = 94/111 (84%)
Strand = Plus / Plus
Query: 101 acgaaaactctcagcattccatggattcatcgtgcgggtaccgggtccatcgcgttgcaa 160
|||||| |||| ||| ||| ||||||||| ||||||||| |||||||| |||||||||
Sbjct: 811 acgaaacctcttagctttctatggattcaccgtgcgggtgccgggtccgccgcgttgcag 870
Query: 161 agagaggagcttcaatagtgcctgtgtcatgcgacctaggtgtaggtttaa 211
|||||||||||||| |||||||| | |||||| ||||||||||||||
Sbjct: 871 ggagaggagcttcaacagtgcctgggatttgcgacacaggtgtaggtttaa 921
>BF01056B2D01
Length = 728
Score = 79.8 bits (40), Expect = 2e-14
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 101 acgaaaactctcagcattccatggattcatcgtgcgggtaccgggtccatcgcgttgcaa 160
|||||| |||||| ||||||||| ||||| ||||||||| ||||||||||| | |||||
Sbjct: 79 acgaaacctctcaacattccatgaattcaccgtgcgggtgccgggtccatcacattgcag 138
Query: 161 agagaggagcttcaatagtgcctg 184
|||||||||||||| || |||||
Sbjct: 139 ggagaggagcttcaacagcgcctg 162
>BF01044B1A07
Length = 806
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 109 tctcagcattccatggattcatcgtgcgggtaccgggtccatcgcgttgcaaagagagga 168
||||||| ||| ||||||||| ||||||||| |||||||||||||| ||| |||||||
Sbjct: 438 tctcagcgttcaatggattcaccgtgcgggtggcgggtccatcgcgtggcagggagagga 497
Query: 169 gcttcaa 175
|||||||
Sbjct: 498 gcttcaa 504
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 202,950
Number of extensions: 3551
Number of successful extensions: 3551
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 3549
Number of HSP's successfully gapped: 11
Length of query: 1993
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1976
Effective length of database: 8,119,229
Effective search space: 16043596504
Effective search space used: 16043596504
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)