BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01112 (UTR included)
(1782 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01004X1B06 1114 0.0
>BF01004X1B06
Length = 681
Score = 1114 bits (562), Expect = 0.0
Identities = 577/582 (99%)
Strand = Plus / Plus
Query: 530 ccaaaattatttccccaggcagttaaagccaatagctttcacagtaaccgattgaaggga 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccaaaattatttccccaggcagttaaagccaatagctttcacagtaaccgattgaaggga 60
Query: 590 aaagtagctatagttactgcatccacagatgggattggatatgcaatagccaagcgctta 649
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 61 aaagtagctatagttactgcatccacagatgggattggatatgctatagccaagcgctta 120
Query: 650 ggcgatgagggtgcctcagtaattataagtagtagaaaggaagataacgttaagaaggct 709
|||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 121 ggcgatgaaggtgcctcagtaattatatgtagtagaaaggaagataacgttaagaaggct 180
Query: 710 acagacagcttacgaaaagatggaataaatgcagaaggacttgtatgtcatgttggtaat 769
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acagacagtttacgaaaagatggaataaatgcagaaggacttgtatgtcatgttggtaat 240
Query: 770 gcagatcaaagaaaaaaattatttgaatttgccagccgtaaatttggtgggattgatatt 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcagatcaaagaaaaaaattatttgaatttgccagccgtaaatttggtgggattgatatt 300
Query: 830 cttgtatcaaatgctgctgttaacccagctgtgtcaccaattttggagacagatgagaaa 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cttgtatcaaatgctgctgttaacccagctgtgtcaccaattttggagacagatgagaaa 360
Query: 890 gttttcgacaaaatatttgaggtgaaccttaaatgttcatggttattggcaaaagaagtt 949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gttttcgacaaaatatttgaggtgaaccttaaatgttcatggttattggcaaaagaagtt 420
Query: 950 tatccagaactacagaagcgtggaggtggaaatattgtattcatttcatcaatcgctgga 1009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tatccagaactacagaagcgtggaggtggaaatattgtattcatttcatcaatcgctgga 480
Query: 1010 tatcaagctatggaacctctgggaccatacagcattagtaaaactgccattattggcttg 1069
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 481 tatcaagctatggaacctctgggaccatacagcataagtaaaactgccattattggcttg 540
Query: 1070 gctaaggcaatagccggtgaagtagtgcatgaaaatataaga 1111
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gctaaggcaatagccggtgaagtagtgcatgaaaatataaga 582
Score = 101 bits (51), Expect = 4e-21
Identities = 51/51 (100%)
Strand = Plus / Plus
Query: 1112 ataacatcaaacgaaataggtaaagagaagagtttgtctatagtgcccatg 1162
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ataacatcaaacgaaataggtaaagagaagagtttgtctatagtgcccatg 681
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 304,320
Number of extensions: 23494
Number of successful extensions: 23494
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 23494
Number of HSP's successfully gapped: 2
Length of query: 1782
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1765
Effective length of database: 8,119,229
Effective search space: 14330439185
Effective search space used: 14330439185
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)