BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01117 (UTR included)
(8131 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01051B2A06 1443 0.0
>BF01051B2A06
Length = 756
Score = 1443 bits (728), Expect = 0.0
Identities = 749/756 (99%)
Strand = Plus / Plus
Query: 6573 ctaatggaaccgctcccgactggtatttacgagtgcaactctaggtgcaagtgtaaagac 6632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctaatggaaccgctcccgactggtatttacgagtgcaactctaggtgcaagtgtaaagac 60
Query: 6633 acttgtcttaaccgcgtcgctcaatatccacttcagctaaatttgcaggtgttcaagacc 6692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acttgtcttaaccgcgtcgctcaatatccacttcagctaaatttgcaggtgttcaagacc 120
Query: 6693 cagaaccgcggttggggcattcgcaccctgaatgacatacccaaggggagcttcctctgt 6752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cagaaccgcggttggggcattcgcaccctgaatgacatacccaaggggagcttcctctgt 180
Query: 6753 acttacgcagggaaactactaacagaggccacagctaccctcgacggtctgaacgagggt 6812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acttacgcagggaaactactaacagaggccacagctaccctcgacggtctgaacgagggt 240
Query: 6813 gacgagtacctggcggagttggactacatcgaggtcgtggaacagatgaaggagggttac 6872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gacgagtacctggcggagttggactacatcgaggtcgtggaacagatgaaggagggttac 300
Query: 6873 gaagaggacataccagagaacatcaagaagatggatgaggctcaaatagcggaacaactc 6932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaagaggacataccagagaacatcaagaagatggatgaggctcaaatagcggaacaactc 360
Query: 6933 tcgatggcgggcgaagaaacacagtcatcgtcttcaggggaaagcagccccaaaagcgct 6992
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 361 tcgatggcgggcgaagaaacacagtcatcgtcttcaggggaaagcagcaccaaaagcgct 420
Query: 6993 gaaaatgacgaccttagcctcgaagacattggtccgggggtcacagagtccagcaaagaa 7052
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 421 gaaaatgacgaccttagcctcgaagacattggtctggaggtcacagagtccagcaaagaa 480
Query: 7053 ctaagggggaaagactcaaagacagacgaagaaatagagagtgcggtgctgaaagttacc 7112
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctaagggggaaagactcgaagacagacgaagaaatagagagtgcggtgctgaaagttacc 540
Query: 7113 gagagattagtgcccacagaagaagatgaaacagttttcacagaggaacagaaatctgtt 7172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gagagattagtgcccacagaagaagatgaaacagttttcacagaggaacagaaatctgtt 600
Query: 7173 gtcatagaagtggaaagttcagtgcccacggaggacgaactctctgaaatgcaggaggaa 7232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtcatagaagtggaaagttcagtgcccacggaggacgaactctctgaaatgcaggaggaa 660
Query: 7233 atcgatgaagattatgattcttcgagtgatgacggagaagatcgagaaccttcgaatttc 7292
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 661 atcgaagaagattatgattcttcgagtgatgatggagaagatcgagaaccttcgaatttc 720
Query: 7293 tcagccagtgctgggatgggagcaaagaagtttaaa 7328
|||||||||||||||||||||||||| |||||||||
Sbjct: 721 tcagccagtgctgggatgggagcaaataagtttaaa 756
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 125,272
Number of extensions: 13454
Number of successful extensions: 13454
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 13454
Number of HSP's successfully gapped: 1
Length of query: 8131
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 8113
Effective length of database: 8,109,745
Effective search space: 65794361185
Effective search space used: 65794361185
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)