BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01123 (UTR included)
(2449 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01017B1D04 1195 0.0
>BF01017B1D04
Length = 751
Score = 1195 bits (603), Expect = 0.0
Identities = 637/648 (98%), Gaps = 1/648 (0%)
Strand = Plus / Plus
Query: 1803 ccggttcaaagtgacgcggtgatggaggacgcgtcggaatcgtctctgagggttcaactg 1862
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 ccggttcaaagtgacgcggtgatggaggacnnntcggaatcgtctctgagggttcaactg 60
Query: 1863 caacaagcgcacgccgccctggccagcctggccgcagagttacgacactgtaaggctaaa 1922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caacaagcgcacgccgccctggccagcctggccgcagagttacgacactgtaaggctaaa 120
Query: 1923 ctggccaaatacgaacacacgcactgatgccaaatacgacaatccgctgtatgtggactt 1982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctggccaaatacgaacacacgcactgatgccaaatacgacaatccgctgtatgtggactt 180
Query: 1983 tgatgagaaccgagagtaaaatgactcgacttgttaggtgtgagtgaagcgagctccgcg 2042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgatgagaaccgagagtaaaatgactcgacttgttaggtgtgagtgaagcgagctccgcg 240
Query: 2043 ttcagacgacagtaccgcagactgttgacggaacaatgttacatccatatattataggaa 2102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttcagacgacagtaccgcagactgttgacggaacaatgttacatccatatattataggaa 300
Query: 2103 gatactcagatcacgttcatccagagacgatcccggcatagaaccgtgttcaaggtataa 2162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatactcagatcacgttcatccagagacgatcccggcatagaaccgtgttcaaggtataa 360
Query: 2163 aacagagaaactcatccctatcacggatgtactgaccaggacagaaattatacattgaat 2222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 361 aacagagaaactcatccctatcacggatgtactgaccaggacagaaattatacattgtac 420
Query: 2223 actaaaggtaaagtttatgaacagtctctgacgctgcgggtacaatagaaggaaacgcag 2282
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acaaaaggtaaagtttatgaacagtctctgacgctgcgggtacaatagaaggaaacgcag 480
Query: 2283 ttattaaatagattcatagatgtaataaaagaataagttgaaggtaaacaattgataa-g 2341
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 481 taattaaatagattcatagatgtaataaaagaataagttgaaggtaaacaattgataagg 540
Query: 2342 tcgtttacatgaaccataggctatatacagcatgttcaagttcgcatcgtcacgcgacat 2401
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttgtttacatgaaccataggctatatacagcatgttcaagttcgcatcgtcacgcgacat 600
Query: 2402 acggagcgtttgatgattttcatcactgaatctttgctcattacagta 2449
|||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 601 acggggcgtttgacgattttcatcactgaatctttgctcattacagta 648
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 210,782
Number of extensions: 3322
Number of successful extensions: 3322
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3321
Number of HSP's successfully gapped: 1
Length of query: 2449
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2432
Effective length of database: 8,119,229
Effective search space: 19745964928
Effective search space used: 19745964928
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)