BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01124 (UTR included)
(1891 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3423_C1 1445 0.0
>BF14_3423_C1
Length = 1262
Score = 1445 bits (729), Expect = 0.0
Identities = 767/779 (98%), Gaps = 3/779 (0%)
Strand = Plus / Plus
Query: 979 aagaggatgaagtcgcaaacaaatcgtcgaagacagatgagttagcatcagaagcgttcg 1038
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 aagaggatgaagtctcaaacaaatcgtcgaagacagatgagttagcatcagaagcgttcg 521
Query: 1039 gtccgctaccgcgagtgggcccggcgctggggcacaaagacttcggacgagcgctgcttc 1098
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gtccgctacctcgagtgggtccggcgctggggcacaaagacttcggacgagcgctgcttc 581
Query: 1099 ctggagaaggagcggccatggcggcctatgtcgcggaggggaaacgaatcccccggagag 1158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 ctggagaaggagcggccatggcggcctatgtcgcggaggggaaacgaatcccccggagag 641
Query: 1159 gagagataggactcacctccgacgagatcgcctcatacgaagctgtgggatacgtcatga 1218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 gagagataggactcacctccgacgagatcgcctcatacgaagctgtgggatacgtcatga 701
Query: 1219 gcggtagcagacatcgtcgtatggaggctgttcgtatccgtaaggagaaccagatctaca 1278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 gcggtagcagacatcgtcgtatggaggctgttcgtatccgtaaggagaaccagatctaca 761
Query: 1279 gcgcggacgagaagcgcgcgctggccgccttcagcaaggaggagcgctcgaggagggagg 1338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 gcgcggacgagaagcgcgcgctggccgccttcagcaaggaggagcgctcgaggagggagg 821
Query: 1339 ccgccatattgtcacagttcagagacgtgctcagcgcccgggcccgcgagtgacgtcact 1398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 ccgccatattgtcacagttcagagacgtgctcagcgcccgggcccgcgagtgacgtcact 881
Query: 1399 accagcacactgatacttgtacgatgtaccgaacacacctgtgcgctgaccgcgatacaa 1458
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 882 accagcacactgatacttgtacgatgtaccgaacacacctgtgcgctgaccgcgttacga 941
Query: 1459 ttatatttttgatgtttcacacttaaacctccgtttgaactgtaaagtggcttgttttat 1518
||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 942 ttatatttttgatgtttcacacttaaacctccgtttgtactgtaaagtggcatgttttat 1001
Query: 1519 atacgaagacacgcacgaggaaacgctccgtgtgtggtgcgacggcagtgaggtgaggcg 1578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 atacgaagacacgcacgaggaaacgctccgtgtgtggtgcgacggcagtgaggtgaggcg 1061
Query: 1579 aggtcactgtctgctgtagttctattgatc---gtgtcaaaaataatgcactgtatatga 1635
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1062 aggtcactgtctactgtagttctattgatcgttgtgtcaaaaataatgcactgtatatga 1121
Query: 1636 atgtaagaaaaaatgtatttgttttataaacgctaattaacattttatattaaaaatata 1695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1122 atgtaagaaaaaatgtatttgttttataaacgctaattaacattttatattaaaaatata 1181
Query: 1696 cattctcggaatcctactctatggcatataattttgataataaaccctagtagtgtcaa 1754
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1182 cattctcagaatcctactctatggcatataattttgataataaaccctagtagtgtcaa 1240
Score = 133 bits (67), Expect = 1e-30
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 912 aagaaatccaagagttccagcagcgacagttctagtagtgaggaggaagtgtgggtggag 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagaaatccaagagttccagcagcgacagttctagtagtgaggaggaagtgtgggtggag 60
Query: 972 aaaggaa 978
|||||||
Sbjct: 61 aaaggaa 67
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 180,927
Number of extensions: 3510
Number of successful extensions: 3510
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3509
Number of HSP's successfully gapped: 2
Length of query: 1891
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1874
Effective length of database: 8,119,229
Effective search space: 15215435146
Effective search space used: 15215435146
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)