BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01132 (UTR included)
(1951 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_344_C1 1639 0.0
>BF14_344_C1
Length = 1132
Score = 1639 bits (827), Expect = 0.0
Identities = 842/847 (99%)
Strand = Plus / Plus
Query: 465 gtccttaaatttgtataagtccctacacacgccaagatgggtagggaggacaaggcctca 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 gtccttaaatttgtataagtccctacacacgccaagatgggtagggaggacaaggcctca 100
Query: 525 tggaagaccaactacttcactaagataattcaattgttagacgagtacccaaaatgcttc 584
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 101 tggaagaccaactacttcactaagataatccaattgttagacgagtacccaaaatgcttc 160
Query: 585 atcgtgggtgccgacaatgtgggctcgcagcaaatgcagcaaatccgtatctccctccgt 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 atcgtgggtgccgacaatgtgggctcgcagcaaatgcagcaaatccgtatctccctccgt 220
Query: 645 gggagcagcattgtactcatgggcaagaacaccatgatgcgtaaggccatcaaggatcat 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 gggagcagcattgtactcatgggcaagaacaccatgatgcgtaaggccatcaaggatcat 280
Query: 705 ttggagaccaacccagcccttgagaagctcctgccccacatcaaaggcaatgttggcttt 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ttggagaccaacccagcccttgagaagctcctgccccacatcaaaggcaatgttggcttt 340
Query: 765 gtgttcacccgcggagatcttgtcgaggtccgtgacaagcttctggagaacaaagtgcgt 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gtgttcacccgcggagatcttgtcgaggtccgtgacaagcttctggagaacaaagtgcgt 400
Query: 825 gccccggctcgtccaggagctattgctcctctggctgtggtcattccagctcataacact 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gccccggctcgtccaggagctattgctcctctggctgtggtcattccagctcataacact 460
Query: 885 ggtttgggtcccgagaaaactgccttcttccaggctctctccatccccaccaagatctcc 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ggtttgggtcccgagaaaactgccttcttccaggctctctccatccccaccaagatctcc 520
Query: 945 aagggtactattgaaatcatcaacgatgtccacatcctgaagcccggagacaaagtggga 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 aagggtactattgaaatcatcaacgatgtccacatcctgaagcccggagacaaagtggga 580
Query: 1005 gcttctgaggcaactcttctcaacatgttaaacatttctcccttctcatatggtctagtt 1064
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 581 gcttctgaggcaactcttctcaacatgttaaacatctctcccttctcatatggtctagtt 640
Query: 1065 gtgaaacaggtctatgactctggcaccatctttgccccggctatccttgacatcaagccc 1124
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 641 gtgaaacaggtctatgactctggcaccatctttgctccggctatccttgacatcaagccc 700
Query: 1125 gaggacttgcgtgccaagttccaagagggagtagccaatgttgccgccctctctttggct 1184
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 701 gaggacttgcgtgccaagttccaggagggagtagccaatgttgccgccctctctttggct 760
Query: 1185 attggatacccgaccgtggcctctgcccctcactccattgccaacggattcaagaacctc 1244
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 761 attggatacccgaccgtggcttctgcccctcactccattgccaacggattcaagaacctc 820
Query: 1245 ctggctatcgctgccgtcaccgaggttgagttcaaggaagccaacaccatcaaggagttc 1304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 ctggctatcgctgccgtcaccgaggttgagttcaaggaagccaacaccatcaaggagttc 880
Query: 1305 atcaagg 1311
|||||||
Sbjct: 881 atcaagg 887
Score = 73.8 bits (37), Expect = 9e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 248 cgcaccgcgcacggttactgtgcgttttgcgttctgtcttg 288
|||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1 cgcaccgctcacggttactgtgcgttttgcgttctgtcttg 41
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 230,089
Number of extensions: 4336
Number of successful extensions: 4336
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4336
Number of HSP's successfully gapped: 2
Length of query: 1951
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1934
Effective length of database: 8,119,229
Effective search space: 15702588886
Effective search space used: 15702588886
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)