BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01138 (UTR included)
(1501 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_739_C1 938 0.0
>BF14_739_C1
Length = 1282
Score = 938 bits (473), Expect = 0.0
Identities = 488/493 (98%)
Strand = Plus / Plus
Query: 456 gctgcatatagagggaatacattaggtctaccaaaaatttgtcccatggaaaatgtttat 515
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 gctgcttatagagggaatacattaggtctaccaaaaatttgtcccatggaaaatgtttat 849
Query: 516 aaaattgataagggcattattctaaactatttgaagaatcattacacgccggacagaatg 575
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 850 aaaattgataaaggcattattctaaactatttgaagaatcattacacaccggacagaatg 909
Query: 576 gttgttgcagctgttggagtagaccatgagccctttgtggaatatgttcaaaagtatttt 635
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 910 gttgttgcagctgttggagtagaccatgagccatttgtggaatatgttcaaaagtatttt 969
Query: 636 gtagacatgaagcctacttggcattcagaagacagtgacacattcaaagcacagaccgac 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970 gtagacatgaagcctacttggcattcagaagacagtgacacattcaaagcacagaccgac 1029
Query: 696 aaatccattgcacaatacactggtggattggaaaaggaggaatgtgaaattccattgtac 755
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1030 aaatccattgcacaatacacaggtggattggaaaaggaggaatgtgaaattccattgtac 1089
Query: 756 ccaggatcggatttacctgaactgtcccatgttgttattggattggagagttgctctcac 815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1090 ccaggatcggatttacctgaactgtcccatgttgttattggattggagagttgctctcac 1149
Query: 816 agcgatccagactttgtggcaacctgtgtgttgaatatgatgatgggtggtggcggttca 875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1150 agcgatccagactttgtggcaacctgtgtgttgaatatgatgatgggtggtggcggttca 1209
Query: 876 ttcagtgctggtggtccaggcaagggaatgtacactcgcctttataccaatgtattgaat 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1210 ttcagtgctggtggtccaggcaagggaatgtacactcgcctttataccaatgtattgaat 1269
Query: 936 cgttatcactgga 948
|||||||||||||
Sbjct: 1270 cgttatcactgga 1282
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 206,564
Number of extensions: 4253
Number of successful extensions: 4253
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4253
Number of HSP's successfully gapped: 1
Length of query: 1501
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1484
Effective length of database: 8,119,229
Effective search space: 12048935836
Effective search space used: 12048935836
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)