BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01142 (UTR included)
(1606 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_110_C1 1580 0.0
BF14_704_C2 105 2e-22
BF14_704_C1 105 2e-22
>BF14_110_C1
Length = 884
Score = 1580 bits (797), Expect = 0.0
Identities = 839/854 (98%), Gaps = 2/854 (0%)
Strand = Plus / Plus
Query: 603 gccgcccccgccacccccgcacacgacgacaacgaccgtgacttgttgagcgccctgcta 662
||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 19 gccgcccccgccacccccgcacannnnnncaacgaccgtgacttgttgagcgccctgcta 78
Query: 663 tggtcaagcgcgagttccctgagcagcagttcggatagtctcacagaacatccagctctg 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 tggtcaagcgcgagttccctgagcagcagttcggatagtctcacagaacatccagctctg 138
Query: 723 ttggtacagaggagagaggaggtgatagcaagaatccttgaattgaaagacaggaagccg 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 ttggtacagaggagagaggaggtgatagcaagaatccttgaattgaaagacaggaagccg 198
Query: 783 gtgaaggttgagttcaagatctacctgacagaaaacactgtcactcgctgggaagctgtg 842
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 199 gtgaaggttgagttcaagatctacctgacagaaaacactgtcactcgctgggaagcggtg 258
Query: 843 gtgaagcagaagtctatgtacctccgcgtgccgtcagtcctgtcagctggcagtaaggac 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gtgaagcagaagtctatgtacctccgcgtgccgtcagtcctgtcagctggcagtaaggac 318
Query: 903 agcttcgtcatgttgctggactttgctgaggagagactcggatgtagcaactgtattatc 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 agcttcgtcatgttgctggactttgctgaggagagactcggatgtagcaactgtattatc 378
Query: 963 tgcgtgtcgaagaatcgctctgaccgctccaccctcctccgcaccttcatgttcatggga 1022
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tgcgtgtcaaagaatcgctctgaccgctccaccctcctccgcaccttcatgttcatggga 438
Query: 1023 ttccagatcctaccgccaaattcacatcaaatggatggcatcgagcatccagattatttg 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ttccagatcctaccgccaaattcacatcaaatggatggcatcgagcatccagattatttg 498
Query: 1083 ttcctgaactataatatgcagtgaccaccgcgctaccttgactaccaccagtccggatcc 1142
||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||
Sbjct: 499 ttcctgaactataatatgcagtgaccaccacgctaccctgaacaccaccagtccggatcc 558
Query: 1143 gcatagagataggatgtgacacagtatctaacagtagtcttagtggtagcaaattttttt 1202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gcatagagataggatgtgacacagtatctaacagtagtcttagtggtagcaaattttttt 618
Query: 1203 ctcggtagtcttattgcttattatgatgtatttttagtttggtcgcgctatcacaacagt 1262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ctcggtagtcttattgcttattatgatgtatttttagtttggtcgcgctatcacaacagt 678
Query: 1263 attggcttggtcggggacaggtcataggatttttatcatagcataggatagtttagatcc 1322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 attggcttggtcggggacaggtcataggatttttatcatagcataggatagtttagatcc 738
Query: 1323 cgggatgagtggcaacccgttgacgcttgttccgtgggta--attttttttcctttctta 1380
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 739 cgggatgagtggcaacccgttgacgcttgttccgtgggtatttttttttttcctttctta 798
Query: 1381 ttatatatgtcgtcgtgtttattaaacccgctccgggagtagtgcgtttgaatgagaaaa 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 ttatatatgtcgtcgtgtttattaaacccgctccgggagtagtgcgtttgaatgagaaaa 858
Query: 1441 tgtaaaaaaaaaaa 1454
||||||||||||||
Sbjct: 859 tgtaaaaaaaaaaa 872
>BF14_704_C2
Length = 406
Score = 105 bits (53), Expect = 2e-22
Identities = 53/53 (100%)
Strand = Plus / Plus
Query: 535 gtggtcctgatgtttctgcgctcggctccgcacctcccggaggggtgaatggc 587
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 gtggtcctgatgtttctgcgctcggctccgcacctcccggaggggtgaatggc 403
>BF14_704_C1
Length = 360
Score = 105 bits (53), Expect = 2e-22
Identities = 53/53 (100%)
Strand = Plus / Plus
Query: 535 gtggtcctgatgtttctgcgctcggctccgcacctcccggaggggtgaatggc 587
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gtggtcctgatgtttctgcgctcggctccgcacctcccggaggggtgaatggc 357
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 267,187
Number of extensions: 14325
Number of successful extensions: 14325
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 14323
Number of HSP's successfully gapped: 3
Length of query: 1606
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1589
Effective length of database: 8,119,229
Effective search space: 12901454881
Effective search space used: 12901454881
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)