BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01151 (UTR included)
(1300 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019B1G10 119 1e-26
BF14_729_C3 115 2e-25
BF14_729_C2 98 4e-20
BF01011A1H06 96 2e-19
BF01024A1H07 94 7e-19
BF01056A1B08 90 1e-17
BF01025A1D01 88 4e-17
BF01012B1C01 86 2e-16
BF01012A1B09 86 2e-16
BF01035X1C09 82 3e-15
BF01018A2H04 82 3e-15
BF01005B1E12 82 3e-15
BF01014A1H02 80 1e-14
BF01058B2C06 78 4e-14
BF01017A2H11 78 4e-14
BF14_2189_C1 72 2e-12
BF01033B1B03 70 1e-11
BF01012A2C11 70 1e-11
BF01047B2B04 68 4e-11
>BF01019B1G10
Length = 488
Score = 119 bits (60), Expect = 1e-26
Identities = 72/76 (94%)
Strand = Plus / Minus
Query: 289 atctcgtctgcccgtgatcacggttactgcaaagtaaccgaaacgtcgggattgtgtagt 348
||||| ||||||||||||||||||||||| |||| |||||||||||||||||| ||||||
Sbjct: 404 atctcatctgcccgtgatcacggttactgaaaaggaaccgaaacgtcgggattatgtagt 345
Query: 349 ttttaaaataataaaa 364
||||||||||||||||
Sbjct: 344 ttttaaaataataaaa 329
>BF14_729_C3
Length = 2041
Score = 115 bits (58), Expect = 2e-25
Identities = 71/74 (95%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 291 ctcgtctgcccgtgatcacggttactgcaaagtaaccgaaacgtcgggattgtgtagttt 350
||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 1589 ctcgtctgcccgtgatcacggttgctgcaaagtaaccgaaacgtcgggattatgtagttt 1648
Query: 351 ttaaaataataaaa 364
|| |||||||||||
Sbjct: 1649 tt-aaataataaaa 1661
>BF14_729_C2
Length = 1289
Score = 97.6 bits (49), Expect = 4e-20
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 290 tctcgtctgcccgtgatcacggttactgcaaagtaaccgaaacgtcgggattgtgtagtt 349
|||||||||||||||||||||||| ||| ||||||||||||||||||||| | |||||||
Sbjct: 528 tctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtcgggagtatgtagtt 587
Query: 350 tttaa 354
|||||
Sbjct: 588 tttaa 592
>BF01011A1H06
Length = 739
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 289 atctcgtctgcccgtgatcacggttactgcaaagtaaccgaaacgtcgggattgtgtagt 348
||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||
Sbjct: 459 atctcgtctgcccgtgatcacggttactgaaaagtaaccgaaacgtcgggagtatgtagt 518
>BF01024A1H07
Length = 726
Score = 93.7 bits (47), Expect = 7e-19
Identities = 69/76 (90%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 289 atctcgtctgcccgtgatcacggttactgcaaagtaaccgaaacgtcgggattgtgtagt 348
||||||||||||||||||||||||| ||| ||||||||||||||||| | ||| |||||
Sbjct: 646 atctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtcngnattatgtag- 704
Query: 349 ttttaaaataataaaa 364
|||||||||||||||
Sbjct: 705 ntttaaaataataaaa 720
>BF01056A1B08
Length = 761
Score = 89.7 bits (45), Expect = 1e-17
Identities = 70/77 (90%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 289 atctcgtctgcccgtgatcacggttactgcaaagtaaccgaaacgtcgggattgtgtagt 348
|||||||| |||||||| ||||||| ||| |||| |||||||||||||||||||||| |
Sbjct: 242 atctcgtccgcccgtgaccacggttcctgaaaagcaaccgaaacgtcgggattgtgttg- 184
Query: 349 ttttaaaataataaaaa 365
|||||||||||||||||
Sbjct: 183 ttttaaaataataaaaa 167
>BF01025A1D01
Length = 764
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 288 aatctcgtctgcccgtgatcacggttactgcaaagtaaccgaaacgtcggga 339
|||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 486 aatctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtcggga 435
>BF01012B1C01
Length = 950
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 291 ctcgtctgcccgtgatcacggttactgcaaagtaaccgaaacgtcgggattgtgtagtt 349
|||||||| |||||||||||| | ||||||||||||||||||||||||| |||||||||
Sbjct: 654 ctcgtctgtccgtgatcacggctgctgcaaagtaaccgaaacgtcgggagtgtgtagtt 712
>BF01012A1B09
Length = 841
Score = 85.7 bits (43), Expect = 2e-16
Identities = 62/67 (92%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 298 gcccgtgatcacggttactgcaaagtaaccgaaacgtcgggattgtgtagtttttaaaat 357
|||||||||||||| | ||| ||||||||||||||||||||||| ||||| |||||||||
Sbjct: 841 gcccgtgatcacggctgctgaaaagtaaccgaaacgtcgggattatgtag-ttttaaaat 783
Query: 358 aataaaa 364
|||||||
Sbjct: 782 aataaaa 776
>BF01035X1C09
Length = 778
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 289 atctcgtctgcccgtgatcacggttactgcaaagtaaccgaaacgtcgggattgtgtagt 348
||||||||| ||||||||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 665 atctcgtcttcccgtgatcacggttgctgcaaagtaaccgaaacgttgggataatgtagt 606
Query: 349 t 349
|
Sbjct: 605 t 605
>BF01018A2H04
Length = 679
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 289 atctcgtctgcccgtgatcacggttactgcaaagtaaccgaaacgtcgg 337
||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 257 atctcatctgcccgtgatcacggttactgcaaagtaaccgaaacctcgg 305
>BF01005B1E12
Length = 657
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 289 atctcgtctgcccgtgatcacggttactgcaaagtaaccgaaacgtcgggatt 341
|||||||||| |||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 302 atctcgtctggccgtgatcacggttgctgcaaagtaaccgaaacctcgggatt 354
>BF01014A1H02
Length = 787
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 289 atctcgtctgcccgtgatcacggttactgcaaagtaaccgaaacgtcgggattgtgtagt 348
||||||||||||||||||||||||| ||| |||| ||| ||||||||||| |||||||||
Sbjct: 253 atctcgtctgcccgtgatcacggttgctgtaaaggaacggaaacgtcggggttgtgtagt 312
>BF01058B2C06
Length = 772
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 289 atctcgtctgcccgtgatcacggttactgcaaagtaaccgaaacgtcgggattgtgtagt 348
|||||||||| |||||||||||| | | ||||||||||||||||||||||| | ||||||
Sbjct: 483 atctcgtctggccgtgatcacggctgcagcaaagtaaccgaaacgtcgggaatatgtagt 424
Query: 349 ttt 351
|||
Sbjct: 423 ttt 421
>BF01017A2H11
Length = 713
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 289 atctcgtctgcccgtgatcacggttactgcaaagtaaccgaaacgtcggga 339
||||||||||||||||||||||||| ||| ||||||||| |||||||||||
Sbjct: 32 atctcgtctgcccgtgatcacggttgctgaaaagtaaccaaaacgtcggga 82
>BF14_2189_C1
Length = 1416
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 292 tcgtctgcccgtgatcacggttactgcaaagtaaccgaaacgtcggga 339
||||||| |||||||||||||| |||||||||||| ||||||||||||
Sbjct: 161 tcgtctgtccgtgatcacggttgctgcaaagtaacagaaacgtcggga 208
>BF01033B1B03
Length = 826
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 289 atctcgtctgcccgtgatcacggttactgcaaagtaaccgaaacgtcggga 339
|||||||||||| ||||||||||| ||||||||||||||||| |||||||
Sbjct: 228 atctcgtctgcctatgatcacggttgctgcaaagtaaccgaaaagtcggga 178
>BF01012A2C11
Length = 780
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 301 cgtgatcacggttactgcaaagtaaccgaaacgtcgggattgtgtagtttttaaa 355
||||||||||||| ||||||||||||||||||||||||| | |||||||||||
Sbjct: 293 cgtgatcacggttgctgcaaagtaaccgaaacgtcgggagcatttagtttttaaa 239
>BF01047B2B04
Length = 762
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/77 (87%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 289 atctcgtctgcccgtgatcacggttactgcaaagtaaccgaaacgtcgggattgtgtagt 348
|||||| ||| |||||||||||||| |||| |||||| ||||||||||||| | | |||
Sbjct: 220 atctcgcctgaccgtgatcacggttgctgcgaagtaaacgaaacgtcgggagtatttag- 162
Query: 349 ttttaaaataataaaaa 365
||||||||||||||||
Sbjct: 161 -tttaaaataataaaaa 146
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 190,429
Number of extensions: 4527
Number of successful extensions: 4527
Number of sequences better than 1.0e-10: 19
Number of HSP's gapped: 4522
Number of HSP's successfully gapped: 19
Length of query: 1300
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1283
Effective length of database: 8,119,229
Effective search space: 10416970807
Effective search space used: 10416970807
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)