BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01156 (UTR included)
(2560 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01005A2F03 1316 0.0
BF01055A1H12 103 1e-21
BF01062A1H02 82 5e-15
BF14_2249_C1 76 3e-13
>BF01005A2F03
Length = 696
Score = 1316 bits (664), Expect = 0.0
Identities = 687/696 (98%)
Strand = Plus / Plus
Query: 1148 tgaaaaggaaatgagaaatcttgttagattatacaatgctaaactaaatgtgcccgaacc 1207
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 tgaaaaggaaatgagaaatcttgttagattatacaatgctaaactaaatgtgcctgaacc 60
Query: 1208 aataatattaaggagtcatgtattggtgatgtctttcatgggagagaatggctggccgtc 1267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aataatattaaggagtcatgtattggtgatgtctttcatgggagagaatggctggccgtc 120
Query: 1268 tcccaagctgaaagatgtagagatatcacaatcaacagctaggtctttgtatagagattg 1327
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 121 tcccaagctgaaagatgtagagatatcacaatcaacggctaggtctttgtatagagattg 180
Query: 1328 cattgttatgatgtggaaaatgtttaatatatgcaaattagttcatgcagatctctccga 1387
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 181 tattgttatgatgtggaaaatgtttaatatatgcaaattagtccatgcagatctctccga 240
Query: 1388 gtttaatcttttgtatcacaacggcaatgtagttgtcattgatgtatcacaatcggtgga 1447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtttaatcttttgtatcacaacggcaatgtagttgtcattgatgtatcacaatcggtgga 300
Query: 1448 acacgatcatccccatgcatttgaattcttgaggaaagactgcactaatatatctgattt 1507
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 301 acacgatcatccccatgcatttgaattcttgaggaaagactgcactaatatatccgattt 360
Query: 1508 cttcagaaaaagaggtgtcgcaacattgaccgtgaaggaattatttgatttcataactga 1567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cttcagaaaaagaggtgtcgcaacattgaccgtgaaggaattatttgatttcataactga 420
Query: 1568 tgcatctattaatgaaagtaatcttgaggagtgtctcgagaaattgtctgagaaggctgc 1627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgcatctattaatgaaagtaatcttgaggagtgtctcgagaaattgtctgagaaggctgc 480
Query: 1628 atcgaggaattttgaggagttgacggcacaagaacaaattgaagaggaggcgtttaagaa 1687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atcgaggaattttgaggagttgacggcacaagaacaaattgaagaggaggcgtttaagaa 540
Query: 1688 tgtgtacatcccaaagagactcgatgaggttataaattatgaacgcgacataaacaaggc 1747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgtgtacatcccaaagagactcgatgaggttataaattatgaacgcgacataaacaaggc 600
Query: 1748 aaagaaaggtgaaacagaagatcttatataccagaagatagctggattcaatgaagattt 1807
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 601 aaagaaaggtgaaacagaagatcttatataccagaagatagctggattcaatgangnnnt 660
Query: 1808 cacggggacggttgataagcctcagatattacaaga 1843
||||||||||||||||||||||||||||||||||||
Sbjct: 661 cacggggacggttgataagcctcagatattacaaga 696
>BF01055A1H12
Length = 743
Score = 103 bits (52), Expect = 1e-21
Identities = 106/124 (85%)
Strand = Plus / Minus
Query: 2223 cagtggcgtgcacaccatagatgcaaataagcactgcataccctacccatacaaaaacta 2282
||||||||||||| ||| ||||||||||||||||||| ||| ||||||||| || |||||
Sbjct: 620 cagtggcgtgcactccacagatgcaaataagcactgcctactctacccatataacaacta 561
Query: 2283 aacctacattgtttaattcttatttggatattttaaatcatacaatacgcaatacgaatg 2342
||||| ||| ||||||||||| | ||| ||| ||||||||| |||| ||||| ||||
Sbjct: 560 aacctgtattatttaattcttactcacatacttttaatcatacattacgaaatacaaatg 501
Query: 2343 ttta 2346
||||
Sbjct: 500 ttta 497
>BF01062A1H02
Length = 876
Score = 81.8 bits (41), Expect = 5e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 2229 cgtgcacaccatagatgcaaataagcactgcataccctacccatacaaaaactaaac 2285
||||||| |||||||||||||||||||||||||||||||||| || || ||||||||
Sbjct: 854 cgtgcactccatagatgcaaataagcactgcataccctacccgtataacaactaaac 798
>BF14_2249_C1
Length = 1315
Score = 75.8 bits (38), Expect = 3e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 2424 aaaacgaaacattttcgatcggccgctgctaactgctagcttcgctatgc 2473
|||||||||||||| ||||||||||||||||||||||||| | |||||||
Sbjct: 1296 aaaacgaaacatttccgatcggccgctgctaactgctagcgttgctatgc 1247
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 336,110
Number of extensions: 6676
Number of successful extensions: 6676
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 6676
Number of HSP's successfully gapped: 4
Length of query: 2560
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2543
Effective length of database: 8,119,229
Effective search space: 20647199347
Effective search space used: 20647199347
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)