BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01193 (UTR included)
(2080 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01052A1F05 1441 0.0
BF01047B2F01 1118 0.0
>BF01052A1F05
Length = 751
Score = 1441 bits (727), Expect = 0.0
Identities = 745/751 (99%)
Strand = Plus / Plus
Query: 347 ggctgtatgaaatcagtatcccctttgtttatgattgctctttgacgctatcaactattt 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggctgtatgaaatcagtatcccctttgtttatgattgctctttgacgctatcaactattt 60
Query: 407 ttcctagtagaatccaagtggattggctgtcggttgccttaaaaagcgtttttcttcctc 466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcctagtagaatccaagtggattggctgtcggttgccttaaaaagcgtttttcttcctc 120
Query: 467 cctgtcccacccgaagccggttgttgtcgccgcgatggaagttgatcgcgccgcatccga 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cctgtcccacccgaagccggttgttgtcgccgcgatggaagttgatcgcgccgcatccga 180
Query: 527 ttcggaaaacgtggccgcggatgagaatgtgaaacaaatcgcggatggcggcgctgggga 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttcggaaaacgtggccgcggatgagaatgtgaaacaaatcgcggatggcggcgctgggga 240
Query: 587 cgccaccggctcccatacggagaaactaagacgcaaaaataaaaaatacacccgcagcaa 646
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 241 cgccaccggctctcatacggagaaactaagacgcaaaaataagaaatacacccgcagcaa 300
Query: 647 cagcaaagaaggcacaagccccggcaccacacctctacctaagtatcgcagttggaaaaa 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cagcaaagaaggcacaagccccggcaccacacctctacctaagtatcgcagttggaaaaa 360
Query: 707 cagccgccggccgcgcaatggtcacggcaggggactgccaaagaaaggtggtgctggggg 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cagccgccggccgcgcaatggtcacggcaggggactgccaaagaaaggtggtgctggggg 420
Query: 767 taagggcgtgtggggtgttcctgggtccgagctgttggaggagtatgtggaggacgcgaa 826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 taagggcgtgtggggtgttcctgggtccgagctgttggaggagtatgtggaggacgcgaa 480
Query: 827 tgaccccaactacgactccgaggccgtcaacggtgacgtggagttcaagcaggtcatagt 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgaccccaactacgactccgaggccgtcaacggtgacgtggagttcaagcaggtcatagt 540
Query: 887 ggaggccgatcctgaggatattgtgcgcaaatctgaaccggtcatcctggagtacttcga 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggaggccgatcctgaggatattgtgcgcaaatctgaaccggtcatcctggagtacttcga 600
Query: 947 gcatggtgacactaatgcagctgctgaagacctgctggagttcgtcacagcctccaggag 1006
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 601 gcatggtgacactaatgcagctgctgaagacctgctggagttcgtcacagcctttaggag 660
Query: 1007 tcacctggtctgtgaaacaatcatcgagatagcgcttgaccacaaaccctcacactgtga 1066
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 661 tcacttggtctgtgaaacaatcatcgagatagcacttgaccacaaaccctcacactgtga 720
Query: 1067 gatggcctccgtacttatatctgatctgtac 1097
|||||||||||||||||||||||||||||||
Sbjct: 721 gatggcctccgtacttatatctgatctgtac 751
>BF01047B2F01
Length = 773
Score = 1118 bits (564), Expect = 0.0
Identities = 570/572 (99%)
Strand = Plus / Plus
Query: 1055 ctcacactgtgagatggcctccgtacttatatctgatctgtacggcagggtgttctctgc 1114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcacactgtgagatggcctccgtacttatatctgatctgtacggcagggtgttctctgc 60
Query: 1115 taaggatatagcctacgcgttcgagcgtctgctggagaagctcccggacctggtgctgga 1174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taaggatatagcctacgcgttcgagcgtctgctggagaagctcccggacctggtgctgga 120
Query: 1175 cacgcctgaagctgctgtgctgatgtccaacttcatagctcgctgtgtcgccgacgactg 1234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cacgcctgaagctgctgtgctgatgtccaacttcatagctcgctgtgtcgccgacgactg 180
Query: 1235 cctgccgccgaagttcgtgcaatccaagactggggctgatcttaactcgtcagccagaca 1294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cctgccgccgaagttcgtgcaatccaagactggggctgatcttaactcgtcagccagaca 240
Query: 1295 agcaataaacagggcggagactcttctgtcaatgaagcaggggctggtgaggctggacaa 1354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agcaataaacagggcggagactcttctgtcaatgaagcaggggctggtgaggctggacaa 300
Query: 1355 tatatggggggtcggaggtggcatcaggccggtcaaatccctgattcgtcagatccagct 1414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tatatggggggtcggaggtggcatcaggccggtcaaatccctgattcgtcagatccagct 360
Query: 1415 gttgctgaaggagtatcttacatctggggacctggctgaggcgatgcgctgtgtcagaga 1474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gttgctgaaggagtatcttacatctggggacctggctgaggcgatgcgctgtgtcagaga 420
Query: 1475 cctggaagttccacatttccaccatgagctggtctatgagacggtgctactagcggtgga 1534
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cctggaagttccacacttccaccatgagctggtctatgagacggtgctactagcggtgga 480
Query: 1535 agccataaactcgagcgtagaggaacagctctgtaccttcctagccgagctgagacgatg 1594
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agccataaactcaagcgtagaggaacagctctgtaccttcctagccgagctgagacgatg 540
Query: 1595 tgtcatcgtgacaccagaccagatggacaggg 1626
||||||||||||||||||||||||||||||||
Sbjct: 541 tgtcatcgtgacaccagaccagatggacaggg 572
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 226,970
Number of extensions: 9245
Number of successful extensions: 9245
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9245
Number of HSP's successfully gapped: 2
Length of query: 2080
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2063
Effective length of database: 8,119,229
Effective search space: 16749969427
Effective search space used: 16749969427
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)